RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 ZNF572Q7Z3I7 529 aaPredicted RBP4.5□□□□□ -1.69
SFPQ-209ENST00000485454 GDF7Q7Z4P5 450 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 LDLRAD3Q86YD5 345 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 TRMT2AQ8IZ69 625 aaKnown RBP4.5□□□□□ -1.69
SFPQ-209ENST00000485454 REPS2Q8NFH8 660 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 OR10H5Q8NGA6 315 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 ZFP28Q8NHY6 868 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 TFAP2CQ92754 450 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 CHFRQ96EP1 664 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 PRRX2Q99811 253 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 SLC46A2Q9BY10 475 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 ZNF768Q9H5H4 540 aaKnown RBP4.5□□□□□ -1.69
SFPQ-209ENST00000485454 TRPM5Q9NZQ8 1165 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 POGKQ9P215 609 aa4.5□□□□□ -1.69
SFPQ-209ENST00000485454 PJA2O43164 708 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 SNRPA1P09661 255 aaKnown RBP4.49□□□□□ -1.69
SFPQ-209ENST00000485454 OSMP13725 252 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 LAG3P18627 525 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 SREBF1P36956 1147 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 MCAMP43121 646 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 PTTG1IPP53801 180 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 PER3P56645 1201 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 PURAQ00577 322 aaKnown RBP4.49□□□□□ -1.69
SFPQ-209ENST00000485454 NHLH2Q02577 135 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 PPP3CAQ08209 521 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 SP140Q13342 867 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 NOMO1Q15155 1222 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 LY6G5CQ5SRR4 150 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 MBNL2Q5VZF2 373 aaKnown RBP4.49□□□□□ -1.69
SFPQ-209ENST00000485454 LRRC55Q6ZSA7 311 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 DDX42Q86XP3 938 aaKnown RBP eCLIP4.49□□□□□ -1.69
SFPQ-209ENST00000485454 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 UHRF1Q96T88 793 aaPredicted RBP4.49□□□□□ -1.69
SFPQ-209ENST00000485454 ADI1Q9BV57 179 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 PUS7LQ9H0K6 701 aaKnown RBP4.49□□□□□ -1.69
SFPQ-209ENST00000485454 DMRT3Q9NQL9 472 aa4.49□□□□□ -1.69
SFPQ-209ENST00000485454 A0A087X1B8 175 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 TMEM191CA6NGB0 347 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 CXorf49A8MYA2 514 aaPredicted RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 RNASET2O00584 256 aaKnown RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ENDOD1O94919 500 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ABHD16AO95870 558 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 IL2RBP14784 551 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ALOX15P16050 662 aaPredicted RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ZSCAN20P17040 1043 aaPredicted RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 KRT4P19013 534 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ZFP36P26651 326 aaKnown RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 CLRN1P58418 232 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 RNASE9P60153 205 aaKnown RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 KLF1Q13351 362 aaPredicted RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 PTPAQ15257 358 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 TIGD2Q4W5G0 525 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ATXN7L2Q5T6C5 722 aaPredicted RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 RNF187Q5TA31 235 aaPredicted RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 KCNV1Q6PIU1 500 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 NECAB2Q7Z6G3 386 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 MRGPRGQ86SM5 289 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 RPUSD2Q8IZ73 545 aaKnown RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 PQLC1Q8N2U9 271 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 CNTD1Q8N815 330 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 RNF169Q8NCN4 708 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 SLC35B2Q8TB61 432 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 PROKR1Q8TCW9 393 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 HOXB13Q92826 284 aaPredicted RBP4.48□□□□□ -1.69
SFPQ-209ENST00000485454 MYEOVQ96EZ4 313 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 CEP89Q96ST8 783 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 IKZF4Q9H2S9 585 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 C11orf21Q9P2W6 132 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ATP8A1Q9Y2Q0 1164 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 CHST2Q9Y4C5 530 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 PCDHGA2Q9Y5H1 932 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 GPR45Q9Y5Y3 372 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 HS3ST4Q9Y661 456 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 ATRNL1Q5VV63 1379 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 CADPSQ9ULU8 1353 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 SBNO2Q9Y2G9 1366 aa4.48□□□□□ -1.69
SFPQ-209ENST00000485454 GAGE12BA1L429 117 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 TRIM75PA6NK02 468 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 RAMP2O60895 175 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 SPATA31D3P0C874 917 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 GSPT1P15170 499 aaKnown RBP4.47□□□□□ -1.69
SFPQ-209ENST00000485454 AGXTP21549 392 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 FAM189BP81408 668 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 MGAT2Q10469 447 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 RRP12Q5JTH9 1297 aaKnown RBP4.47□□□□□ -1.69
SFPQ-209ENST00000485454 Q6ZPA2 131 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 SPATA31D4Q6ZUB0 917 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 PLXDC1Q8IUK5 500 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 AMOTL1Q8IY63 956 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 FBXO18Q8NFZ0 1043 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 MLST8Q9BVC4 326 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 SENP6Q9GZR1 1112 aaPredicted RBP4.47□□□□□ -1.69
SFPQ-209ENST00000485454 AKIP1Q9NQ31 210 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 ZNF277Q9NRM2 450 aaPredicted RBP4.47□□□□□ -1.69
SFPQ-209ENST00000485454 LANCL2Q9NS86 450 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 MOCS1Q9NZB8 636 aa4.47□□□□□ -1.69
SFPQ-209ENST00000485454 TMEM200CA6NKL6 621 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 DRGXA6NNA5 263 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms