RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	GABRD	O14764	452 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	PRKD3	O94806	890 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	ZFPL1	O95159	310 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	LAG3	P18627	525 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	PLA2G5	P39877	138 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	ID4	P47928	161 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	IRF9	Q00978	393 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	FIGN	Q5HY92	759 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	CXorf57	Q6NSI4	855 aa	Known RBP	5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	ARHGAP36	Q6ZRI8	547 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	RASSF3	Q86WH2	238 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	NME9	Q86XW9	330 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	AMOTL1	Q8IY63	956 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	TCEAL8	Q8IYN2	117 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	MDGA1	Q8NFP4	955 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	HOOK2	Q96ED9	719 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	USP36	Q9P275	1121 aa	Known RBP	5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	KCNG1	Q9UIX4	513 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	ZNF180	Q9UJW8	692 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	CBLC	Q9ULV8	474 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	SRPK3	Q9UPE1	567 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	NOC2L	Q9Y3T9	749 aa	Known RBP	5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	PTPRM	P28827	1452 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	KCNAB3	O43448	404 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	CLASP2	O75122	1294 aa	Known RBP	5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	SCGB1D2	O95969	90 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	KRT18	P05783	430 aa	Known RBP	5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	ATF3	P18847	181 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	CD40	P25942	277 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	RECQL	P46063	649 aa	Predicted RBP	5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	SEC24C	P53992	1094 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	HDAC1	Q13547	482 aa	Predicted RBP	5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	LRRC32	Q14392	662 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	PTPN21	Q16825	1174 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	GFOD2	Q3B7J2	385 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	FAM102B	Q5T8I3	360 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	OSTM1	Q86WC4	334 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	ANKRD53	Q8N9V6	530 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	ZNF610	Q8N9Z0	462 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	COG1	Q8WTW3	980 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	SSH1	Q8WYL5	1049 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	LINC00476	Q8WZB0	136 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	MYEOV	Q96EZ4	313 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	TCF25	Q9BQ70	676 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	TCF7L1	Q9HCS4	588 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	UCKL1	Q9NWZ5	548 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	ANKRD6	Q9Y2G4	727 aa		5.05	□□□□□ -1.6
VPS8-223	ENST00000485024	KRT37	O76014	449 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	SCAF4	O95104	1147 aa	Known RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	MATN4	O95460	622 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	MYBL2	P10244	700 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	ZSCAN20	P17040	1043 aa	Predicted RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	KRT15	P19012	456 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	ERVK-21	P61565	698 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	FAM189B	P81408	668 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	ADCY1	Q08828	1119 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	BROX	Q5VW32	411 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	FRMD7	Q6ZUT3	714 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	PNMA8A	Q86V59	439 aa	Predicted RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	CMTR2	Q8IYT2	770 aa	Known RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	KIAA1958	Q8N8K9	716 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	TSR2	Q969E8	191 aa	Known RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	E2F7	Q96AV8	911 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	ACAP3	Q96P50	834 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	IL23A	Q9NPF7	189 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	TOMM22	Q9NS69	142 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	ATP23	Q9Y6H3	246 aa		5.04	□□□□□ -1.6
VPS8-223	ENST00000485024	TNKS	O95271	1327 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	C2orf78	A6NCI8	922 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	AHRR	A9YTQ3	701 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	ABLIM3	O94929	683 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	C4BPA	P04003	597 aa	Known RBP	5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	MYL1	P05976	194 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	CXCR5	P32302	372 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	PRELP	P51888	382 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	KIF11	P52732	1056 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	JAM2	P57087	298 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	BPIFB4	P59827	614 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	C1QTNF8	P60827	252 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	NHLH1	Q02575	133 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	TERF2	Q15554	542 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	TMEM240	Q5SV17	173 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	PGM2L1	Q6PCE3	622 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	LCORL	Q8N3X6	602 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	CLRN3	Q8NCR9	226 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	LPP	Q93052	612 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	NUP88	Q99567	741 aa	Predicted RBP	5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	CHMP4A	Q9BY43	222 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	SMURF1	Q9HCE7	757 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	KCNH7	Q9NS40	1196 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	MKS1	Q9NXB0	559 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	VWA7	Q9Y334	891 aa		5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	LUC7L2	Q9Y383	392 aa	Known RBP	5.03	□□□□□ -1.6
VPS8-223	ENST00000485024	PLEKHD1	A6NEE1	506 aa		5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms