RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 LINC01565O15544 149 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 MCF2P10911 925 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 KCNA5P22460 613 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 PROZP22891 400 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 LIG4P49917 911 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 GRIK3Q13003 919 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 NOLC1Q14978 699 aaKnown RBP eCLIP17.78■□□□□ 0.44
DDR1-246ENST00000485023 TMC7Q7Z402 723 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 COLGALT2Q8IYK4 626 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 IQUBQ8NA54 791 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 AUTS2Q8WXX7 1259 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 TMEM175Q9BSA9 504 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 CCDC94Q9BW85 323 aaPredicted RBP17.78■□□□□ 0.44
DDR1-246ENST00000485023 UBE2ZQ9H832 354 aaPredicted RBP17.78■□□□□ 0.44
DDR1-246ENST00000485023 MRPL44Q9H9J2 332 aaKnown RBP17.78■□□□□ 0.44
DDR1-246ENST00000485023 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 LZTS1Q9Y250 596 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 UNC80Q8N2C7 3258 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 CASTOR2A6NHX0 329 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 HIDE1A8MVS5 230 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 TOM1L1O75674 476 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 ALDH2P05091 517 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 GAP43P17677 238 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 CASP1P29466 404 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 GRM5P41594 1212 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 KCNQ1P51787 676 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 YARSP54577 528 aaKnown RBP17.77■□□□□ 0.44
DDR1-246ENST00000485023 DSC1Q08554 894 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 HERC4Q5GLZ8 1057 aaPredicted RBP17.77■□□□□ 0.44
DDR1-246ENST00000485023 ZPBP2Q6X784 338 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 VPS52Q8N1B4 723 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 VN1R3Q9BXE9 311 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 HAPLN2Q9GZV7 340 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 TNMDQ9H2S6 317 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 IKZF4Q9H2S9 585 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 CUEDC2Q9H467 287 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 TLE6Q9H808 572 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 PANK4Q9NVE7 773 aa17.77■□□□□ 0.44
DDR1-246ENST00000485023 A0A1B0GVL5 298 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 TISP43B9A030 160 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 H3BQ06 376 aaPredicted RBP17.76■□□□□ 0.43
DDR1-246ENST00000485023 FSCN2O14926 492 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 CLDN3O15551 220 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 GCNT3O95395 438 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 PFKFB1P16118 471 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 ASIC1P78348 528 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 NUCB2P80303 420 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 RBM10P98175 930 aaKnown RBP17.76■□□□□ 0.43
DDR1-246ENST00000485023 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 HASPINQ8TF76 798 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 HPS3Q969F9 1004 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 PPP2R3CQ969Q6 453 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 PAAF1Q9BRP4 392 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 FGFBP2Q9BYJ0 223 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 BLZF1Q9H2G9 400 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 KCNH3Q9ULD8 1083 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 COG5Q9UP83 839 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 ZMYM2Q9UBW7 1377 aa17.76■□□□□ 0.43
DDR1-246ENST00000485023 NR1I2O75469 434 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 THP07101 528 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 MYBP10242 640 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 AFMP43652 599 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 CASP5P51878 434 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 MRPS5P82675 430 aaKnown RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 GTF2BQ00403 316 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 CLUL1Q15846 466 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 MAP4K3Q8IVH8 894 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 ATXN2LQ8WWM7 1075 aaKnown RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 PABPC5Q96DU9 382 aaKnown RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 ACAP3Q96P50 834 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 ASB2Q96Q27 587 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 COL25A1Q9BXS0 654 aaPredicted RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 TRIM9Q9C026 710 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 SCAND2PQ9GZW5 306 aaPredicted RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 ZBP1Q9H171 429 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 TOPORSQ9NS56 1045 aaPredicted RBP17.75■□□□□ 0.43
DDR1-246ENST00000485023 KBTBD4Q9NVX7 518 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 SERTAD1Q9UHV2 236 aa17.75■□□□□ 0.43
DDR1-246ENST00000485023 XIRP2A4UGR9 3374 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.74■□□□□ 0.43
DDR1-246ENST00000485023 ANKRD63C9JTQ0 380 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 TBX10O75333 385 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 NDUFV1P49821 464 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 DLX2Q07687 328 aaPredicted RBP17.74■□□□□ 0.43
DDR1-246ENST00000485023 MCL1Q07820 350 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 KCNA1Q09470 495 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 COASYQ13057 564 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 TUSC3Q13454 348 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 ZBTB41Q5SVQ8 909 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 ADALQ6DHV7 355 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 LLGL2Q6P1M3 1020 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 SLC39A4Q6P5W5 647 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 ZNF720Q7Z2F6 126 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 CCDC65Q8IXS2 484 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 CEP57L1Q8IYX8 460 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 B3GALT6Q96L58 329 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 SNX27Q96L92 541 aa17.74■□□□□ 0.43
DDR1-246ENST00000485023 MSTO1Q9BUK6 570 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms