RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZP2Q05996 745 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 SLC39A14Q15043 492 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 PTPN14Q15678 1187 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 NAB2Q15742 525 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 ANKRD54Q6NXT1 300 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 GJD3Q8N144 294 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 SPRYD3Q8NCJ5 442 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDAC1-209ENST00000484305 PAAF1Q9BRP4 392 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 CDT1Q9H211 546 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 S1PR5Q9H228 398 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 PRKAG3Q9UGI9 489 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 ODF2LQ9ULJ1 636 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 USP15Q9Y4E8 981 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-209ENST00000484305 CITO14578 2027 aa14.17□□□□□ -0.14
HDAC1-209ENST00000484305 ABLIM1O14639 778 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 LILRB3O75022 631 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 NR1I2O75469 434 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 SOD2P04179 222 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 THP07101 528 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 HSP90AA1P07900 732 aaKnown RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 SRGAP2BP0DMP2 458 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 MAPTP10636 758 aaKnown RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 PROZP22891 400 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 SSTR3P32745 418 aaPredicted RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 DDIT3P35638 169 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 GIT2Q14161 759 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 ZNF568Q3ZCX4 644 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 FOXD4L5Q5VV16 416 aaPredicted RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 SYCE2Q6PIF2 218 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 ADHFE1Q8IWW8 467 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 RNF168Q8IYW5 571 aaPredicted RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 CEP120Q8N960 986 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 FOXD4L4Q8WXT5 416 aaPredicted RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 LARP4BQ92615 738 aaKnown RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 ZBTB45Q96K62 511 aaPredicted RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 COLEC11Q9BWP8 271 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 APOL5Q9BWW9 433 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 LARSQ9P2J5 1176 aaKnown RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 TFIP11Q9UBB9 837 aaKnown RBP14.16□□□□□ -0.14
HDAC1-209ENST00000484305 STK39Q9UEW8 545 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
HDAC1-209ENST00000484305 CASTOR2A6NHX0 329 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 C2CD2LO14523 706 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
HDAC1-209ENST00000484305 CNPP09543 421 aaKnown RBP14.15□□□□□ -0.14
HDAC1-209ENST00000484305 EPCAMP16422 314 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 NASPP49321 788 aaPredicted RBP14.15□□□□□ -0.14
HDAC1-209ENST00000484305 NCKAP1LP55160 1127 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 OSTNP61366 133 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 STRN3Q13033 797 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 TUSC3Q13454 348 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 GLRA4Q5JXX5 417 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 MPZL3Q6UWV2 235 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 HAUS6Q7Z4H7 955 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 APBB1IPQ7Z5R6 666 aaPredicted RBP14.15□□□□□ -0.14
HDAC1-209ENST00000484305 MYCT1Q8N699 235 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 TMEM87AQ8NBN3 555 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 SLC22A17Q8WUG5 538 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 CASP10Q92851 521 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 B3GALT6Q96L58 329 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 KLHL5Q96PQ7 755 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 TCHPQ9BT92 498 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 HERC2P3Q9BVR0 1158 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 GPR62Q9BZJ7 368 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 MRPL17Q9NRX2 175 aaKnown RBP14.15□□□□□ -0.14
HDAC1-209ENST00000484305 DAXXQ9UER7 740 aaPredicted RBP14.15□□□□□ -0.14
HDAC1-209ENST00000484305 CCDC39Q9UFE4 941 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 ADAM28Q9UKQ2 775 aa14.15□□□□□ -0.14
HDAC1-209ENST00000484305 MORC2Q9Y6X9 1032 aaPredicted RBP14.15□□□□□ -0.14
HDAC1-209ENST00000484305 PLXNA3P51805 1871 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 FAM13AO94988 1023 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 URODP06132 367 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 ZSCAN22P10073 491 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-209ENST00000484305 MCF2P10911 925 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 GRM5P41594 1212 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 ZNF131P52739 623 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 HSP90AA2PQ14568 343 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-209ENST00000484305 KIAA0319Q5VV43 1072 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 FUT10Q6P4F1 479 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 ALKAL1Q6UXT8 129 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 KRI1Q8N9T8 703 aaKnown RBP14.14□□□□□ -0.15
HDAC1-209ENST00000484305 LINC00301Q8NCQ3 95 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 HASPINQ8TF76 798 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 SUSD6Q92537 303 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 PPP1R10Q96QC0 940 aaKnown RBP14.14□□□□□ -0.15
HDAC1-209ENST00000484305 CCDC94Q9BW85 323 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-209ENST00000484305 PANK2Q9BZ23 570 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 EPHX3Q9H6B9 360 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 PARVGQ9HBI0 331 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 CDH22Q9UJ99 828 aa14.14□□□□□ -0.15
HDAC1-209ENST00000484305 PDCD11Q14690 1871 aaKnown RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 A0A087X0B3 334 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 MEFVO15553 781 aaPredicted RBP14.13□□□□□ -0.15
HDAC1-209ENST00000484305 TRAK2O60296 914 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 TADA2AO75478 443 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 TOM1L1O75674 476 aa14.13□□□□□ -0.15
HDAC1-209ENST00000484305 KIF4AO95239 1232 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms