RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 LRFN3Q9BTN0 628 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 QRSL1Q9H0R6 528 aaKnown RBP5.22□□□□□ -1.57
PTCD3-214ENST00000483925 RIC8AQ9NPQ8 531 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 BLOC1S4Q9NUP1 217 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 GULP1Q9UBP9 304 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 SERPINB13Q9UIV8 391 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 MSRAQ9UJ68 235 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 TUBD1Q9UJT1 453 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 NPHP3-ACAD11A0A0J9YXS1 232 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 BICDL2A1A5D9 508 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 DDX3XO00571 662 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTCD3-214ENST00000483925 DVL2O14641 736 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 FFAR2O15552 330 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 IRAK2O43187 625 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 FRS3O43559 492 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 NCK2O43639 380 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 FGF18O76093 207 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 RPN1P04843 607 aaKnown RBP5.21□□□□□ -1.58
PTCD3-214ENST00000483925 ALDH2P05091 517 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 CYP2C8P10632 490 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 GNAT1P11488 350 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 KRT9P35527 623 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 NAP1L1P55209 391 aaKnown RBP5.21□□□□□ -1.58
PTCD3-214ENST00000483925 JAM2P57087 298 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 SPIRE1Q08AE8 756 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 PRKG1Q13976 671 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTCD3-214ENST00000483925 CCDC184Q52MB2 194 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 SPATA1Q5VX52 437 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 MBNL2Q5VZF2 373 aaKnown RBP5.21□□□□□ -1.58
PTCD3-214ENST00000483925 ARHGAP36Q6ZRI8 547 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 RINLQ6ZS11 566 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 KCNK18Q7Z418 384 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 TBC1D1Q86TI0 1168 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-214ENST00000483925 FAM26EQ8N5C1 309 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 PPM1NQ8N819 430 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 LINC00482Q8N8I6 264 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 SLC30A5Q8TAD4 765 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 ADAMTS17Q8TE56 1095 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 DDX11Q96FC9 970 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 SLC2A13Q96QE2 648 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 KCNJ15Q99712 375 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 TTLL2Q9BWV7 592 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 TMEM120AQ9BXJ8 343 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 WNT8AQ9H1J5 351 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 MS4A5Q9H3V2 200 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 SMURF1Q9HCE7 757 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 PCDH18Q9HCL0 1135 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 HELLSQ9NRZ9 838 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTCD3-214ENST00000483925 CORO2BQ9UQ03 480 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 STXBP5LQ9Y2K9 1186 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 CEP83Q9Y592 693 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 RPGRIP1LQ68CZ1 1315 aa5.21□□□□□ -1.58
PTCD3-214ENST00000483925 FAM170AA1A519 330 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 ANKRD18BA2A2Z9 1011 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 EIF3FO00303 357 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 NPHS1O60500 1241 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 CD4P01730 458 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 HSP90AB1P08238 724 aaKnown RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 RPS6KB1P23443 525 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 FXR1P51114 621 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 CLNS1AP54105 237 aaKnown RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 BCAR1P56945 870 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 APBA1Q02410 837 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 ZNF543Q08ER8 600 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 KIAA2012Q0VF49 1180 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 SMAD4Q13485 552 aaKnown RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 EPHA7Q15375 998 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 PAN2Q504Q3 1202 aaKnown RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 CT83Q5H943 113 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 THEMIS2Q5TEJ8 643 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 ESPNLQ6ZVH7 1005 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 CXorf67Q86X51 503 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 AUTS2Q8WXX7 1259 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 EAF2Q96CJ1 260 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 ZNF496Q96IT1 587 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 ANO3Q9BYT9 981 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 UNKQ9C0B0 810 aaKnown RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 ALG13Q9NP73 1137 aaKnown RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 PNPLA8Q9NP80 782 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 SLC13A4Q9UKG4 626 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 PCDHGB2Q9Y5G2 931 aa5.2□□□□□ -1.58
PTCD3-214ENST00000483925 TIMM13Q9Y5L4 95 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-214ENST00000483925 A0A088AWK7 358 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 C7orf72A4D263 438 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 POM121BA6NF01 834 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 EYA2O00167 538 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 AREL1O15033 823 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 TMCC2O75069 709 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 DDX58O95786 925 aaKnown RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 FUCA1P04066 466 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 NTRK1P04629 796 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 AMY2AP04746 511 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 RPLP2P05387 115 aaKnown RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 XBP1P17861 261 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 TNFRSF1AP19438 455 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 AMY2BP19961 511 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 PTX3P26022 381 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms