RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, human

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SENP6-208	ENST00000483859	METTL14	Q9HCE5	456 aa	Known RBP	4.37	□□□□□ -1.71
SENP6-208	ENST00000483859	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.37	□□□□□ -1.71
SENP6-208	ENST00000483859		Q9UFV3	132 aa		4.37	□□□□□ -1.71
SENP6-208	ENST00000483859	FAM184B	Q9ULE4	1060 aa		4.37	□□□□□ -1.71
SENP6-208	ENST00000483859	KLHL33	A6NCF5	533 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	WNT10B	O00744	389 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	NDUFS2	O75306	463 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	PF4V1	P10720	104 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	ZSCAN20	P17040	1043 aa	Predicted RBP	4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	RGS19	P49795	217 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	HGFAC	Q04756	655 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	CD69	Q07108	199 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	PPP3CA	Q08209	521 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	MGAT5	Q09328	741 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	ADAM15	Q13444	863 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	DGKD	Q16760	1214 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	STRIP1	Q5VSL9	837 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	TRIM68	Q6AZZ1	485 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	DPP8	Q6V1X1	898 aa	Predicted RBP	4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	CXXC5	Q7LFL8	322 aa	Known RBP	4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	BMP8A	Q7Z5Y6	402 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	AMOTL1	Q8IY63	956 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	CDYL2	Q8N8U2	506 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	JPH3	Q8WXH2	748 aa	Predicted RBP	4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	AUTS2	Q8WXX7	1259 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	RPGR	Q92834	1020 aa	Known RBP	4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	NELFA	Q9H3P2	528 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	TES	Q9UGI8	421 aa	Known RBP	4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	SCOC	Q9UIL1	159 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	ZNF180	Q9UJW8	692 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	ZBTB21	Q9ULJ3	1066 aa		4.36	□□□□□ -1.71
SENP6-208	ENST00000483859	C2orf78	A6NCI8	922 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	CYP27B1	O15528	508 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	RHOBTB3	O94955	611 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	LY86	O95711	162 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	CFB	P00751	764 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	CCND1	P24385	295 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	EDNRB	P24530	442 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	PTGS2	P35354	604 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	TCIRG1	Q13488	830 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	RIN1	Q13671	783 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	PPP2R5A	Q15172	486 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	ADRM1	Q16186	407 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	TMEM240	Q5SV17	173 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	HECTD2	Q5U5R9	776 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	ABHD15	Q6UXT9	468 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	RD3	Q7Z3Z2	195 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	CATIP	Q7Z7H3	387 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	C14orf80	Q86SX3	495 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	MSL3	Q8N5Y2	521 aa	Known RBP	4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	OR14C36	Q8NHC7	312 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	PPP1R14C	Q8TAE6	165 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	WDR48	Q8TAF3	677 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	PROKR1	Q8TCW9	393 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	DPF2	Q92785	391 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	ANLN	Q9NQW6	1124 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	SAE1	Q9UBE0	346 aa	Predicted RBP	4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	KCNG1	Q9UIX4	513 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	SPEF1	Q9Y4P9	236 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	COL4A3	Q01955	1670 aa		4.35	□□□□□ -1.71
SENP6-208	ENST00000483859	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.34	□□□□□ -1.71
SENP6-208	ENST00000483859		A0A1W2PR48	441 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	SLC26A4	O43511	780 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	SNUPN	O95149	360 aa	Known RBP	4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	GAA	P10253	952 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	RECQL	P46063	649 aa	Predicted RBP	4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	KRT85	P78386	507 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	SPIDR	Q14159	915 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	SEPT2	Q15019	361 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	C3orf36	Q3SXR2	165 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	EFCAB2	Q5VUJ9	269 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	RHOU	Q7L0Q8	258 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	WDR75	Q8IWA0	830 aa	Known RBP	4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	NRG4	Q8WWG1	115 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	RAB24	Q969Q5	203 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	RAX2	Q96IS3	184 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	HIST1H2AH	Q96KK5	128 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	WDR92	Q96MX6	357 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	HIST1H2AJ	Q99878	128 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	ACE2	Q9BYF1	805 aa	Predicted RBP	4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	WNT8A	Q9H1J5	351 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	OR10A2	Q9H208	303 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	RSAD1	Q9HA92	442 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	TCF7L1	Q9HCS4	588 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	RNF7	Q9UBF6	113 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	LIMCH1	Q9UPQ0	1083 aa		4.34	□□□□□ -1.71
SENP6-208	ENST00000483859	COL11A2	P13942	1736 aa	Predicted RBP	4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	XDH	P47989	1333 aa		4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	SPATA31A6	Q5VVP1	1343 aa		4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	HMGB1	P09429	215 aa	Known RBP	4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	MYB	P10242	640 aa		4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	PTTG1IP	P53801	180 aa		4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	ADAM8	P78325	824 aa		4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	KIF23	Q02241	960 aa	Predicted RBP	4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	ZNF267	Q14586	743 aa	Predicted RBP	4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	CLEC14A	Q86T13	490 aa		4.33	□□□□□ -1.72
SENP6-208	ENST00000483859	CHPF	Q8IZ52	775 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms