RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 MRPS35P82673 323 aaKnown RBP13.29□□□□□ -0.28
CCDC78-213ENST00000482878 LRRC14Q15048 493 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 NFIL3Q16649 462 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 TSNAXIP1Q2TAA8 658 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 CCDC38Q502W7 563 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 SYDE2Q5VT97 1194 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 RNF220Q5VTB9 566 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 NEK9Q8TD19 979 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 VCXQ9H320 206 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 MAP3K13O43283 966 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 RARAP10276 462 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 CRKP46108 304 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 COPS2P61201 443 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 SLC29A2Q14542 456 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 AOC3Q16853 763 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 MUM1Q2TAK8 710 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 ANO7Q6IWH7 933 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 CCDC174Q6PII3 467 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 SYCP3Q8IZU3 236 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 NAP1L3Q99457 506 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-213ENST00000482878 DDX23Q9BUQ8 820 aaKnown RBP13.29□□□□□ -0.28
CCDC78-213ENST00000482878 ADAM7Q9H2U9 754 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 GRHL1Q9NZI5 618 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 WRAP73Q9P2S5 460 aaPredicted RBP13.29□□□□□ -0.28
CCDC78-213ENST00000482878 PNMA3Q9UL41 463 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 ZBTB21Q9ULJ3 1066 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 KIF13BQ9NQT8 1826 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 FAM187AA6NFU0 413 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 ASAP2O43150 1006 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 PTGIRP43119 386 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 IFI35P80217 286 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-213ENST00000482878 MYL7Q01449 175 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 KLC1Q07866 573 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 NUGGCQ68CJ6 796 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 HS2ST1Q7LGA3 356 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 FAM178BQ8IXR5 827 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 ZNF317Q96PQ6 595 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-213ENST00000482878 AZI2Q9H6S1 392 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 TMEM165Q9HC07 324 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 MLXIPLQ9NP71 852 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 PICK1Q9NRD5 415 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 GREB1LQ9C091 1923 aaPredicted RBP13.28□□□□□ -0.28
CCDC78-213ENST00000482878 H0YIN7 160 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 SCNN1BP51168 640 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 DHX34Q14147 1143 aaKnown RBP13.28□□□□□ -0.28
CCDC78-213ENST00000482878 KIF22Q14807 665 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 DENND2CQ68D51 928 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 PRELID2Q8N945 189 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 LMO3Q8TAP4 145 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 FGD4Q96M96 766 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 SEMA4AQ9H3S1 761 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 ADAMTSL1Q8N6G6 1762 aa13.28□□□□□ -0.28
CCDC78-213ENST00000482878 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 DDX39AO00148 427 aaKnown RBP13.27□□□□□ -0.28
CCDC78-213ENST00000482878 SUN1O94901 812 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 CYP3A4P08684 503 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.28
CCDC78-213ENST00000482878 JAG1P78504 1218 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 PPP2R5EQ16537 467 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 TTC27Q6P3X3 843 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 CENPTQ96BT3 561 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.28
CCDC78-213ENST00000482878 AGPAT1Q99943 283 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 SYT15Q9BQS2 421 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 TRIM7Q9C029 511 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 MTFR1LQ9H019 292 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 ETNK1Q9HBU6 452 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 FAM198AQ9UFP1 575 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 CREB3O43889 395 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 PSMD10O75832 226 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 CFBP00751 764 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 FTLP02792 175 aaPredicted RBP13.27□□□□□ -0.28
CCDC78-213ENST00000482878 CNGA1P29973 690 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 MMP13P45452 471 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 DLG4P78352 724 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 ODR4Q5SWX8 454 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.28
CCDC78-213ENST00000482878 ATXN2LQ8WWM7 1075 aaKnown RBP13.27□□□□□ -0.28
CCDC78-213ENST00000482878 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 FGFR1OP2Q9NVK5 253 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 CTTNBP2NLQ9P2B4 639 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 PI4KBQ9UBF8 816 aa13.27□□□□□ -0.28
CCDC78-213ENST00000482878 PHF2O75151 1096 aa13.27□□□□□ -0.29
CCDC78-213ENST00000482878 ADRA2BP18089 450 aa13.27□□□□□ -0.29
CCDC78-213ENST00000482878 BFSP1Q12934 665 aa13.27□□□□□ -0.29
CCDC78-213ENST00000482878 ZNF746Q6NUN9 644 aaPredicted RBP13.27□□□□□ -0.29
CCDC78-213ENST00000482878 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
CCDC78-213ENST00000482878 PGM2Q96G03 612 aa13.27□□□□□ -0.29
CCDC78-213ENST00000482878 SUDS3Q9H7L9 328 aaPredicted RBP13.27□□□□□ -0.29
CCDC78-213ENST00000482878 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.27□□□□□ -0.29
CCDC78-213ENST00000482878 EXOC3O60645 756 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 ZNF131P52739 623 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 DRG2P55039 364 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms