RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 DEPTORQ8TB45 409 aa13.35□□□□□ -0.27
FAM3D-202ENST00000482623 NTPCRQ9BSD7 190 aaKnown RBP13.35□□□□□ -0.27
FAM3D-202ENST00000482623 CCDC113Q9H0I3 377 aa13.35□□□□□ -0.27
FAM3D-202ENST00000482623 TMEM134Q9H6X4 195 aa13.35□□□□□ -0.27
FAM3D-202ENST00000482623 EPS15L1Q9UBC2 864 aa13.35□□□□□ -0.27
FAM3D-202ENST00000482623 PARP2Q9UGN5 583 aa13.35□□□□□ -0.27
FAM3D-202ENST00000482623 DNM3Q9UQ16 869 aa13.35□□□□□ -0.27
FAM3D-202ENST00000482623 TMEM189-UBE2V1I3L0A0 370 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 BRD1O95696 1058 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
FAM3D-202ENST00000482623 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
FAM3D-202ENST00000482623 SCP2P22307 547 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 AKAP5P24588 427 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 CCT6AP40227 531 aaKnown RBP13.34□□□□□ -0.27
FAM3D-202ENST00000482623 IER5LQ5T953 404 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 PRSS33Q8NF86 280 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 UROC1Q96N76 676 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 TTPALQ9BTX7 342 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 GPR62Q9BZJ7 368 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 PDZD7Q9H5P4 517 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 GPRC5CQ9NQ84 441 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 MAN1C1Q9NR34 630 aa13.34□□□□□ -0.27
FAM3D-202ENST00000482623 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.34□□□□□ -0.27
FAM3D-202ENST00000482623 K7ERI5 159 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 SLC26A4O43511 780 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
FAM3D-202ENST00000482623 TRAPPC3O43617 180 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 DTNBO60941 627 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 PRKCBP05771 671 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 HOXA9P31269 272 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 GUCY1B3Q02153 619 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 TCF15Q12870 199 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 PTGDRQ13258 359 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 RILPL1Q5EBL4 403 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
FAM3D-202ENST00000482623 DCLRE1AQ6PJP8 1040 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 POTEGQ6S5H5 508 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 KCNN1Q92952 543 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 KIF2CQ99661 725 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 PRKD2Q9BZL6 878 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 BHMT2Q9H2M3 363 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 WNT16Q9UBV4 365 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 KIAA1024Q9UPX6 916 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 TNFSF13BQ9Y275 285 aa13.33□□□□□ -0.28
FAM3D-202ENST00000482623 A0A087WWV3 80 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 PROB1E7EW31 1015 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 C2CD2LO14523 706 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 TGM5O43548 720 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 ZMYND10O75800 440 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 WEE2P0C1S8 567 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 RABEP1Q15276 862 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 NAB2Q15742 525 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 XKR4Q5GH76 650 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 RIN2Q8WYP3 895 aaPredicted RBP13.32□□□□□ -0.28
FAM3D-202ENST00000482623 ZNF707Q96C28 371 aaPredicted RBP13.32□□□□□ -0.28
FAM3D-202ENST00000482623 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
FAM3D-202ENST00000482623 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 RTP3Q9BQQ7 232 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 APOL6Q9BWW8 343 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 TOPORSQ9NS56 1045 aaPredicted RBP13.32□□□□□ -0.28
FAM3D-202ENST00000482623 SLC38A7Q9NVC3 462 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 SNTG2Q9NY99 539 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 CDH22Q9UJ99 828 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 DUSP12Q9UNI6 340 aa13.32□□□□□ -0.28
FAM3D-202ENST00000482623 PTGESO14684 152 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 ST18O60284 1047 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 RECQL4O94761 1208 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 MCM2P49736 904 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 TOB1P50616 345 aaPredicted RBP13.31□□□□□ -0.28
FAM3D-202ENST00000482623 RAB33AQ14088 237 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 TMEM132AQ24JP5 1023 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 HYIQ5T013 277 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 ATF7IP2Q5U623 682 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 ARL6IP4Q66PJ3 421 aaKnown RBP13.31□□□□□ -0.28
FAM3D-202ENST00000482623 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 ALKAL1Q6UXT8 129 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
FAM3D-202ENST00000482623 LNX1Q8TBB1 728 aaPredicted RBP13.31□□□□□ -0.28
FAM3D-202ENST00000482623 BSNDQ8WZ55 320 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 SMG7Q92540 1137 aaKnown RBP13.31□□□□□ -0.28
FAM3D-202ENST00000482623 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 KLK14Q9P0G3 267 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 MAFFQ9ULX9 164 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 BACE2Q9Y5Z0 518 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 CLUHO75153 1309 aa13.31□□□□□ -0.28
FAM3D-202ENST00000482623 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
FAM3D-202ENST00000482623 ASGR2P07307 311 aa13.3□□□□□ -0.28
FAM3D-202ENST00000482623 LAMP2P13473 410 aa13.3□□□□□ -0.28
FAM3D-202ENST00000482623 FGFR3P22607 806 aa13.3□□□□□ -0.28
FAM3D-202ENST00000482623 SP100P23497 879 aaPredicted RBP13.3□□□□□ -0.28
FAM3D-202ENST00000482623 GUCY2CP25092 1073 aa13.3□□□□□ -0.28
FAM3D-202ENST00000482623 GRM5P41594 1212 aa13.3□□□□□ -0.28
FAM3D-202ENST00000482623 FOSBP53539 338 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms