RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CYP2U1Q7Z449 544 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 VSIG10LQ86VR7 867 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 PALB2Q86YC2 1186 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 NPAS3Q8IXF0 933 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 AMOTL1Q8IY63 956 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 PIGKQ92643 395 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 FOXJ1Q92949 421 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 PCMTD1Q96MG8 357 aaPredicted RBP7.53□□□□□ -1.2
CHD6-209ENST00000482596 IWS1Q96ST2 819 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 TRAIPQ9BWF2 469 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 BRD9Q9H8M2 597 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 DBNLQ9UJU6 430 aaKnown RBP7.53□□□□□ -1.2
CHD6-209ENST00000482596 ZNF215Q9UL58 517 aaPredicted RBP7.53□□□□□ -1.2
CHD6-209ENST00000482596 GINS2Q9Y248 185 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 BLACEA4D250 179 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 M0QZ92 97 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 RPS6KA5O75582 802 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 AP1G2O75843 785 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 CHGBP05060 677 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 GALTP07902 379 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 MYCLP12524 364 aaPredicted RBP7.52□□□□□ -1.21
CHD6-209ENST00000482596 MARK3P27448 753 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 GBP1P32455 592 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 SOX9P48436 509 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 LMAN2Q12907 356 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 LRRC32Q14392 662 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 DSC3Q14574 896 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 USH1GQ495M9 461 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 ARHGEF16Q5VV41 709 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 PMS2CLQ68D20 193 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 TXNDC11Q6PKC3 985 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 TAS1R1Q7RTX1 841 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 BPHLQ86WA6 291 aaPredicted RBP7.52□□□□□ -1.21
CHD6-209ENST00000482596 FAM174AQ8TBP5 190 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 LRRN4Q8WUT4 740 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 MED8Q96G25 268 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 ZNF334Q9HCZ1 680 aaPredicted RBP7.52□□□□□ -1.21
CHD6-209ENST00000482596 MRPL17Q9NRX2 175 aaKnown RBP7.52□□□□□ -1.21
CHD6-209ENST00000482596 ZDHHC7Q9NXF8 308 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 DNAJB4Q9UDY4 337 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 EVLQ9UI08 416 aaPredicted RBP7.52□□□□□ -1.21
CHD6-209ENST00000482596 MTORP42345 2549 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 KDM3AQ9Y4C1 1321 aa7.52□□□□□ -1.21
CHD6-209ENST00000482596 HELZP42694 1942 aaKnown RBP7.51□□□□□ -1.21
CHD6-209ENST00000482596 NID2Q14112 1375 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 CLEC18AA5D8T8 446 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 TGM5O43548 720 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 ADH1AP07327 375 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 FCARP24071 287 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 SLC11A1P49279 550 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 KRT76Q01546 638 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 RHDQ02161 417 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 SP4Q02446 784 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 TLE3Q04726 772 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 NFATC3Q12968 1075 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 CCDC96Q2M329 555 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 CLEC18BQ6UXF7 455 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 CYFIP1Q7L576 1253 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 ECHDC2Q86YB7 292 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 MAP4K3Q8IVH8 894 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 GLYCTKQ8IVS8 523 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 CLEC18CQ8NCF0 446 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 IL31RAQ8NI17 732 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 TRAPPC12Q8WVT3 735 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 TTC9Q92623 222 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 MCRS1Q96EZ8 462 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 GTPBP2Q9BX10 602 aaKnown RBP7.51□□□□□ -1.21
CHD6-209ENST00000482596 NRDE2Q9H7Z3 1164 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 PXMP2Q9NR77 195 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 CHST12Q9NRB3 414 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 TMEM74BQ9NUR3 256 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 HCFC1R1Q9NWW0 138 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 HEMK1Q9Y5R4 338 aaPredicted RBP7.51□□□□□ -1.21
CHD6-209ENST00000482596 PCDH15Q96QU1 1955 aa7.51□□□□□ -1.21
CHD6-209ENST00000482596 HIVEP1P15822 2718 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 GAS2O43903 313 aaKnown RBP7.5□□□□□ -1.21
CHD6-209ENST00000482596 BCKDHBP21953 392 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 PDXDC1Q6P996 788 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 ELMSAN1Q6PJG2 1045 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 TMED8Q6PL24 325 aaPredicted RBP7.5□□□□□ -1.21
CHD6-209ENST00000482596 BTNL9Q6UXG8 535 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 FAM228AQ86W67 206 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 HDDC3Q8N4P3 179 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 RPS6KC1Q96S38 1066 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 PPP1R16BQ96T49 567 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 NUSAP1Q9BXS6 441 aaKnown RBP7.5□□□□□ -1.21
CHD6-209ENST00000482596 PLEKHA4Q9H4M7 779 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 DPP7Q9UHL4 492 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 APOBEC2Q9Y235 224 aaKnown RBP7.5□□□□□ -1.21
CHD6-209ENST00000482596 PCDHB9Q9Y5E1 797 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 SLC4A4Q9Y6R1 1079 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 EVPLQ92817 2033 aa7.5□□□□□ -1.21
CHD6-209ENST00000482596 ATXN2Q99700 1313 aaKnown RBP7.5□□□□□ -1.21
CHD6-209ENST00000482596 PLIN4Q96Q06 1357 aa7.49□□□□□ -1.21
CHD6-209ENST00000482596 ABCA2Q9BZC7 2435 aa7.49□□□□□ -1.21
CHD6-209ENST00000482596 SLC38A8A6NNN8 435 aa7.49□□□□□ -1.21
CHD6-209ENST00000482596 MINDY4BA8MYZ0 360 aa7.49□□□□□ -1.21
CHD6-209ENST00000482596 PLK4O00444 970 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms