RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ZNF845Q96IR2 970 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 KCNJ15Q99712 375 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 ACAD9Q9H845 621 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 CPNE7Q9UBL6 633 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 PCDHA2Q9Y5H9 948 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 SLC16A6O15403 523 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 GOSR1O95249 250 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 SCGB1D1O95968 90 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 CD3EP07766 207 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 HNRNPA1P09651 372 aaKnown RBP eCLIP8.97□□□□□ -0.97
LSM5-210ENST00000480956 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 ACADMP11310 421 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 TPP2P29144 1249 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 CTCFP49711 727 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 ACVR2BQ13705 512 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 SETMARQ53H47 684 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 HP1BP3Q5SSJ5 553 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 GDF6Q6KF10 455 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 FSTL4Q6MZW2 842 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 TMTC3Q6ZXV5 915 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 PRPF39Q86UA1 669 aaKnown RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 NOSTRINQ8IVI9 506 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 PLD6Q8N2A8 252 aaKnown RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 NRG4Q8WWG1 115 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 SLC35A4Q96G79 324 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 GPR63Q9BZJ6 419 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 EIF2B3Q9NR50 452 aaKnown RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 PIH1D1Q9NWS0 290 aaKnown RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 DPP7Q9UHL4 492 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 GTF3C4Q9UKN8 822 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 CNPY2Q9Y2B0 182 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 TMEM5Q9Y2B1 443 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 CFAP20Q9Y6A4 193 aaKnown RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 FLT1P17948 1338 aa8.96□□□□□ -0.97
LSM5-210ENST00000480956 HMX3A6NHT5 357 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 H3BM21 787 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 JUPP14923 745 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 SUMO3P55854 103 aaPredicted RBP8.96□□□□□ -0.98
LSM5-210ENST00000480956 ID3Q02535 119 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 LRMPQ12912 555 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 ADAM15Q13444 863 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 SNW1Q13573 536 aaKnown RBP8.96□□□□□ -0.98
LSM5-210ENST00000480956 ATP2B3Q16720 1220 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 CTXN3Q4LDR2 81 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 NAA16Q6N069 864 aaPredicted RBP8.96□□□□□ -0.98
LSM5-210ENST00000480956 TIGD7Q6NT04 549 aaPredicted RBP8.96□□□□□ -0.98
LSM5-210ENST00000480956 IL27RAQ6UWB1 636 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 CCDC170Q8IYT3 715 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 ADGRG2Q8IZP9 1017 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 STON2Q8WXE9 905 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 KAT5Q92993 513 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 HDAC10Q969S8 669 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 COG8Q96MW5 612 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 PI4K2AQ9BTU6 479 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 ACE2Q9BYF1 805 aaPredicted RBP8.96□□□□□ -0.98
LSM5-210ENST00000480956 SEPSECSQ9HD40 501 aaKnown RBP8.96□□□□□ -0.98
LSM5-210ENST00000480956 SERHLQ9NQF3 203 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 TRMT1Q9NXH9 659 aaKnown RBP8.96□□□□□ -0.98
LSM5-210ENST00000480956 CLEC1BQ9P126 229 aa8.96□□□□□ -0.98
LSM5-210ENST00000480956 GTPBP1O00178 669 aaKnown RBP8.95□□□□□ -0.98
LSM5-210ENST00000480956 AURKAO14965 403 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 PLATP00750 562 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 AOAHP28039 575 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 TMEM266Q2M3C6 531 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 C5orf22Q49AR2 442 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 KRTCAP3Q53RY4 240 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 C1orf141Q5JVX7 400 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 SNX30Q5VWJ9 437 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 UNC45BQ8IWX7 931 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 USHBP1Q8N6Y0 703 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 RNF214Q8ND24 703 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 CYP2W1Q8TAV3 490 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 TSGA13Q96PP4 275 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 EIF2AQ9BY44 585 aaKnown RBP8.95□□□□□ -0.98
LSM5-210ENST00000480956 SYNCQ9H7C4 482 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 ATP6V0A2Q9Y487 856 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 PASKQ96RG2 1323 aa8.95□□□□□ -0.98
LSM5-210ENST00000480956 COL17A1Q9UMD9 1497 aaPredicted RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 FAM234BA2RU67 622 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 H3BUI4 141 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 SPTLC2O15270 562 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 ITGA5P08648 1049 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 CST5P28325 142 aaPredicted RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 CASQ1P31415 396 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 DEKP35659 375 aaKnown RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 DSC2Q02487 901 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 IL10RAQ13651 578 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 RAB30Q15771 203 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 UVSSAQ2YD98 709 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 CWF19L1Q69YN2 538 aaKnown RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 ALKBH5Q6P6C2 394 aaKnown RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 KLHDC10Q6PID8 442 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 KLHL17Q6TDP4 642 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 ESPNLQ6ZVH7 1005 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 GALNT7Q86SF2 657 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 CEP97Q8IW35 865 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 GPR161Q8N6U8 529 aaKnown RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 PPP1R14CQ8TAE6 165 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 TSPEARQ8WU66 669 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 THAP4Q8WY91 577 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms