RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 DCAF4L1Q3SXM0 396 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 RILPL1Q5EBL4 403 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 CCDC149Q6ZUS6 474 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 KREMEN2Q8NCW0 462 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 RABGGTAQ92696 567 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 TMX3Q96JJ7 454 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 B3GALT6Q96L58 329 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 GPR62Q9BZJ7 368 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 RXFP1Q9HBX9 757 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 CHST7Q9NS84 486 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 CACNG4Q9UBN1 327 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 SORCS3Q9UPU3 1222 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 DNM3Q9UQ16 869 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 USTQ9Y2C2 406 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 USP20Q9Y2K6 914 aa15.79■□□□□ 0.12
ATG4B-218ENST00000479554 PLXNA3P51805 1871 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 PHLPP2Q6ZVD8 1323 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 CASTOR2A6NHX0 329 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 E9PMD0 336 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 H3BQV1 296 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 K7ELQ4 463 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-218ENST00000479554 PTGESO14684 152 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 TADA2AO75478 443 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 THP07101 528 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 GJB2P29033 226 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 USP41Q3LFD5 358 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 ATF7IP2Q5U623 682 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 EEF1DP3Q658K8 133 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 C15orf39Q6ZRI6 1047 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 APBB1IPQ7Z5R6 666 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-218ENST00000479554 ZDHHC14Q8IZN3 488 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 FEZF2Q8TBJ5 459 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 ACSF2Q96CM8 615 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-218ENST00000479554 ASIC4Q96FT7 647 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.78■□□□□ 0.12
ATG4B-218ENST00000479554 ZNF318Q5VUA4 2279 aa15.78■□□□□ 0.12
ATG4B-218ENST00000479554 CCDC169A6NNP5 214 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 K7ERI5 159 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 HIP1RO75146 1068 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 CD2BP2O95400 341 aaKnown RBP15.77■□□□□ 0.12
ATG4B-218ENST00000479554 CDC25AP30304 524 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-218ENST00000479554 MCM2P49736 904 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 ATP2C1P98194 919 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-218ENST00000479554 CREMQ03060 361 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 DMP1Q13316 513 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-218ENST00000479554 IL17AQ16552 155 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 GPR65Q8IYL9 337 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 UBALD2Q8IYN6 164 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 FBXL6Q8N531 539 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 CMASQ8NFW8 434 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-218ENST00000479554 HASPINQ8TF76 798 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 RIN2Q8WYP3 895 aaPredicted RBP15.77■□□□□ 0.12
ATG4B-218ENST00000479554 DRC1Q96MC2 740 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 PAAF1Q9BRP4 392 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 FNIP2Q9P278 1114 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 GDAQ9Y2T3 454 aa15.77■□□□□ 0.12
ATG4B-218ENST00000479554 KIF4AO95239 1232 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 MYBP10242 640 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 NPTX2P47972 431 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 PEX3P56589 373 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 ZRSR1Q15695 479 aaKnown RBP15.76■□□□□ 0.11
ATG4B-218ENST00000479554 NT5DC1Q5TFE4 455 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 OTOP3Q7RTS5 596 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 PALB2Q86YC2 1186 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 DAW1Q8N136 415 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 MMTAG2Q9BU76 263 aaKnown RBP15.76■□□□□ 0.11
ATG4B-218ENST00000479554 RUSC1Q9BVN2 902 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 LIMD1Q9UGP4 676 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 SMC3Q9UQE7 1217 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 C2orf16Q68DN1 1984 aa15.76■□□□□ 0.11
ATG4B-218ENST00000479554 CCDC195A0A1B0GUA6 201 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 BRD1O95696 1058 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 C1RP00736 705 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 ASGR2P07307 311 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 RPL17P18621 184 aaKnown RBP15.75■□□□□ 0.11
ATG4B-218ENST00000479554 RTP2Q5QGT7 225 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 RINT1Q6NUQ1 792 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 CYP26C1Q6V0L0 522 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 KCNK18Q7Z418 384 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 GLYCTKQ8IVS8 523 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 HDAC7Q8WUI4 952 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 TIPINQ9BVW5 301 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 MRPL4Q9BYD3 311 aaKnown RBP15.75■□□□□ 0.11
ATG4B-218ENST00000479554 CXCL16Q9H2A7 254 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 PLEKHA4Q9H4M7 779 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 KMT5AQ9NQR1 393 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 TNFSF13BQ9Y275 285 aa15.75■□□□□ 0.11
ATG4B-218ENST00000479554 VWA3AA6NCI4 1184 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 TGM5O43548 720 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 RFPL2O75678 378 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 SPATA31D3P0C874 917 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 NHLH1Q02575 133 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 ELAVL2Q12926 359 aaKnown RBP15.74■□□□□ 0.11
ATG4B-218ENST00000479554 MAPK7Q13164 816 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 NAB2Q15742 525 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 ZNF568Q3ZCX4 644 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 GLRA4Q5JXX5 417 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 HYIQ5T013 277 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms