RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 HYAL3O43820 417 aaPredicted RBP7.37□□□□□ -1.23
USP48-208ENST00000479177 DKC1O60832 514 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP48-208ENST00000479177 RHOBTB3O94955 611 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 HMGCRP04035 888 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 XRCC6P12956 609 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP48-208ENST00000479177 HOXD10P28358 340 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 YWHABP31946 246 aaKnown RBP7.37□□□□□ -1.23
USP48-208ENST00000479177 TCF7P36402 384 aaPredicted RBP7.37□□□□□ -1.23
USP48-208ENST00000479177 TNFAIP2Q03169 654 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 EHHADHQ08426 723 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 COASYQ13057 564 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 ANO6Q4KMQ2 910 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 ARSHQ5FYA8 562 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 TTC39BQ5VTQ0 682 aaPredicted RBP7.37□□□□□ -1.23
USP48-208ENST00000479177 FAM160B1Q5W0V3 765 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 PLA2G4FQ68DD2 849 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 ALKBH2Q6NS38 261 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 RINT1Q6NUQ1 792 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 C1orf186Q6ZWK4 172 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 UNC13DQ70J99 1090 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 ANO5Q75V66 913 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 TLK2Q86UE8 772 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 OR6J1Q8NGC5 347 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 AFG1LQ8WV93 481 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 REEP2Q9BRK0 252 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 DNAJC25Q9H1X3 360 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 ANKEF1Q9NU02 776 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 EXOC1Q9NV70 894 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 RMND1Q9NWS8 449 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 KCND2Q9NZV8 630 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 ADCY3O60266 1144 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 USO1O60763 962 aaKnown RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 TBCAO75347 108 aaKnown RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 CAVIN2O95810 425 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 LGALS2P05162 132 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 MMP3P08254 477 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 AKR1A1P14550 325 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 ACPPP15309 386 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 ELNP15502 786 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 GUCY2CP25092 1073 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 SOX18P35713 384 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 STAT5BP51692 787 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 ZNF131P52739 623 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 PRMT2P55345 433 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 NPEPPSP55786 919 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 ATP11AP98196 1134 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 CACNB2Q08289 660 aaPredicted RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 PDE4CQ08493 712 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 MAPK7Q13164 816 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 GIT2Q14161 759 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 ARHGEF6Q15052 776 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 XKR3Q5GH77 459 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 UTP14CQ5TAP6 766 aaKnown RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 MAP3K21Q5TCX8 1036 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 ISM2Q6H9L7 571 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 PDE12Q6L8Q7 609 aaKnown RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 ADAMTSL4Q6UY14 1074 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 DYMQ7RTS9 669 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 PLPPR4Q7Z2D5 763 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 DNAJC5GQ8N7S2 189 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 MLKLQ8NB16 471 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 CCDC47Q96A33 483 aaKnown RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 PLD4Q96BZ4 506 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 FAM167AQ96KS9 214 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 CCDC43Q96MW1 224 aaKnown RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 CEP89Q96ST8 783 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 RBSNQ9H1K0 784 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 CHRDQ9H2X0 955 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 AZI2Q9H6S1 392 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 FOXD3Q9UJU5 478 aaPredicted RBP7.36□□□□□ -1.23
USP48-208ENST00000479177 FAM184BQ9ULE4 1060 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 GDAQ9Y2T3 454 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 Q9Y3F1 56 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 SCN10AQ9Y5Y9 1956 aa7.36□□□□□ -1.23
USP48-208ENST00000479177 RSPH10B2B2RC85 870 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 HIP1RO75146 1068 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 DUSP11O75319 330 aaKnown RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 KRT18P05783 430 aaKnown RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 RSPH10BP0C881 870 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 ZNF286BP0CG31 522 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 IDEP14735 1019 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 GAP43P17677 238 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 MARK3P27448 753 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 ZNF165P49910 485 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 SLC26A2P50443 739 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 LRP8Q14114 963 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 PLCB4Q15147 1175 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 PCSK7Q16549 785 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 COBLL1Q53SF7 1204 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 XKR9Q5GH70 373 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 FAM26FQ5R3K3 315 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 ZNF658Q5TYW1 1059 aaPredicted RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 OTUD6AQ7L8S5 288 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 SFR1Q86XK3 245 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 CCDC65Q8IXS2 484 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 DMRTC2Q8IXT2 367 aaPredicted RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 SMYD4Q8IYR2 804 aaPredicted RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 DAW1Q8N136 415 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms