RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CPA5Q8WXQ8 436 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 DDX1Q92499 740 aaKnown RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 SHC3Q92529 594 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 RAPGEF5Q92565 580 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 MOV10L1Q9BXT6 1211 aaKnown RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 TXLNGYQ9BZA5 131 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 XPNPEP1Q9NQW7 623 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 HNRNPDLO14979 420 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 CLDN3O15551 220 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 MAPTP10636 758 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 HNRNPH1P31943 449 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 ACOT2P49753 483 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 HMGCS2P54868 508 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 PPP2R2AP63151 447 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 SP2Q02086 613 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 PRKG1Q13976 671 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 CCDC38Q502W7 563 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 ZBTB41Q5SVQ8 909 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 ZNF772Q68DY9 489 aaPredicted RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 SNRNP48Q6IEG0 339 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 CCDC137Q6PK04 289 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 B4GALNT4Q76KP1 1039 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 NLRX1Q86UT6 975 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 MAP4K3Q8IVH8 894 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 ATG4AQ8WYN0 398 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 CD101Q93033 1021 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 ZBTB45Q96K62 511 aaPredicted RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 FAM114A2Q9NRY5 505 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 DNAJC17Q9NVM6 304 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 DDX20Q9UHI6 824 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 HACL1Q9UJ83 578 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 ATP8B3O60423 1300 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 PTPRJQ12913 1337 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 ZBED4O75132 1171 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 GJB6O95452 261 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 FAM107AO95990 144 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 IFI35P80217 286 aaPredicted RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 SLC29A2Q14542 456 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 TRIP13Q15645 432 aaPredicted RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 VSIG10LQ86VR7 867 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 CCDC25Q86WR0 208 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 PASD1Q8IV76 773 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 LPAR1Q92633 364 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 TMEM143Q96AN5 459 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 BICD1Q96G01 975 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 SELENOSQ9BQE4 189 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 MTFR1LQ9H019 292 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 SEPT9Q9UHD8 586 aaPredicted RBP11.6□□□□□ -0.55
VPS52-217ENST00000478934 PCDHA10Q9Y5I2 948 aa11.6□□□□□ -0.55
VPS52-217ENST00000478934 GOLGA6L10A0A0M3HER8 536 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 PHF2O75151 1096 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 SMTNP53814 917 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 MFAP3P55082 362 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 MTERF2Q49AM1 385 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 ICE2Q659A1 982 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 C11orf63Q6NUN7 778 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 UBL4BQ8N7F7 174 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 EIF1ADQ8N9N8 165 aaKnown RBP11.59□□□□□ -0.55
VPS52-217ENST00000478934 FBXL13Q8NEE6 735 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 PWWP2AQ96N64 755 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 HAPLN2Q9GZV7 340 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 CCDC113Q9H0I3 377 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 P4HA2O15460 535 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 CPP00450 1065 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 KCNA2P16389 499 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 RFX1P22670 979 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 JAK3P52333 1124 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 CDR2Q01850 454 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 ALCAMQ13740 583 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 SIX1Q15475 284 aaPredicted RBP11.59□□□□□ -0.55
VPS52-217ENST00000478934 EMC10Q5UCC4 262 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 PRUNE1Q86TP1 453 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 CCDC105Q8IYK2 499 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 ST6GALNAC4Q9H4F1 302 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 TMEM8AQ9HCN3 771 aa11.59□□□□□ -0.55
VPS52-217ENST00000478934 TRAPPC3O43617 180 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 ZBTB7AO95365 584 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 CTNNA2P26232 953 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 FNTAP49354 379 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 GTF2A1P52655 376 aaPredicted RBP11.58□□□□□ -0.55
VPS52-217ENST00000478934 PMS2P54278 862 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 NLRP11P59045 1033 aaKnown RBP11.58□□□□□ -0.55
VPS52-217ENST00000478934 KRT76Q01546 638 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 GHRHRQ02643 423 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 SLC13A5Q86YT5 568 aaPredicted RBP11.58□□□□□ -0.55
VPS52-217ENST00000478934 DHX37Q8IY37 1157 aaKnown RBP11.58□□□□□ -0.55
VPS52-217ENST00000478934 EPS8L3Q8TE67 593 aaKnown RBP11.58□□□□□ -0.55
VPS52-217ENST00000478934 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.55
VPS52-217ENST00000478934 NT5C1BQ96P26 610 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms