RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 KIAA1107Q9UPP5 1409 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 RGPD3A6NKT7 1758 aaPredicted RBP6.67□□□□□ -1.34
CCDC171-207ENST00000478913 RGPD4Q7Z3J3 1758 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 H0YGN5 161 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 MT-CO1P00395 513 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 PDGFRBP09619 1106 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 XPAP23025 273 aaPredicted RBP6.67□□□□□ -1.34
CCDC171-207ENST00000478913 IARSP41252 1262 aaKnown RBP6.67□□□□□ -1.34
CCDC171-207ENST00000478913 GPR3P46089 330 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 GPR15P49685 360 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 LGALS4P56470 323 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 SPIDRQ14159 915 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 PCOLCEQ15113 449 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 ABCB5Q2M3G0 1257 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 TRIM68Q6AZZ1 485 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 KLHDC10Q6PID8 442 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 LGI4Q8N135 537 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 OR14C36Q8NHC7 312 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 FEZF2Q8TBJ5 459 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 STAG1Q8WVM7 1258 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 RAX2Q96IS3 184 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 WDR92Q96MX6 357 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 KCNC2Q96PR1 638 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 ASPSCR1Q9BZE9 553 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 KIAA1683Q9H0B3 1180 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 DNAJC28Q9NX36 388 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 PRSS50Q9UI38 385 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 TMPRSS11EQ9UL52 423 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 STXBP5LQ9Y2K9 1186 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 PTPN22Q9Y2R2 807 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 VWA7Q9Y334 891 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 NCANO14594 1321 aa6.67□□□□□ -1.34
CCDC171-207ENST00000478913 GLTPD2A6NH11 291 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 GABRDO14764 452 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 NRP2O60462 931 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 H2AFYO75367 372 aaKnown RBP6.66□□□□□ -1.34
CCDC171-207ENST00000478913 CELA3BP08861 270 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 MYBL2P10244 700 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 MTHFD2P13995 350 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 MRE11P49959 708 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 SESN2P58004 480 aaPredicted RBP6.66□□□□□ -1.34
CCDC171-207ENST00000478913 TRIM25Q14258 630 aaKnown RBP6.66□□□□□ -1.34
CCDC171-207ENST00000478913 CCDC178Q5BJE1 867 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 PLEKHH3Q7Z736 793 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 COL23A1Q86Y22 540 aaPredicted RBP6.66□□□□□ -1.34
CCDC171-207ENST00000478913 CBARPQ8N350 705 aaPredicted RBP6.66□□□□□ -1.34
CCDC171-207ENST00000478913 PRDM12Q9H4Q4 367 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 BAHCC1Q9P281 2608 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 PASKQ96RG2 1323 aa6.66□□□□□ -1.34
CCDC171-207ENST00000478913 VIRMAQ69YN4 1812 aaKnown RBP6.66□□□□□ -1.34
CCDC171-207ENST00000478913 SHTN1A0MZ66 631 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 PRRG2O14669 202 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 CA12O43570 354 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 B4GALT3O60512 393 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 CFBP00751 764 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 NRG3P56975 720 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 MRPS9P82933 396 aaKnown RBP6.65□□□□□ -1.34
CCDC171-207ENST00000478913 SRSF2Q01130 221 aaKnown RBP6.65□□□□□ -1.34
CCDC171-207ENST00000478913 ADAM15Q13444 863 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 CLUL1Q15846 466 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 MAN2A1Q16706 1144 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 INAVAQ3KP66 663 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 TOR2AQ5JU69 321 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 AGBL4Q5VU57 503 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 SMIM5Q71RC9 77 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 LYSMD2Q8IV50 215 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 ZDHHC14Q8IZN3 488 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 C1orf162Q8NEQ5 155 aaPredicted RBP6.65□□□□□ -1.34
CCDC171-207ENST00000478913 AUTS2Q8WXX7 1259 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 NKD2Q969F2 451 aaPredicted RBP6.65□□□□□ -1.34
CCDC171-207ENST00000478913 GFM2Q969S9 779 aaKnown RBP6.65□□□□□ -1.34
CCDC171-207ENST00000478913 OR10A2Q9H208 303 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.65□□□□□ -1.34
CCDC171-207ENST00000478913 MKS1Q9NXB0 559 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 DPP7Q9UHL4 492 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 CDY2AQ9Y6F7 541 aa6.65□□□□□ -1.34
CCDC171-207ENST00000478913 A0A0A6YYK5 440 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-207ENST00000478913 A0A0G2JLW4 131 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 TRIM75PA6NK02 468 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 B4GALT4O60513 344 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 FSBPO95073 299 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 BUD31P41223 144 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-207ENST00000478913 LMBR1LQ6UX01 489 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 USP30Q70CQ3 517 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 GAREM2Q75VX8 874 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 SLC41A1Q8IVJ1 513 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 GLB1L2Q8IW92 636 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 DEFB123Q8N688 67 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 PUS7Q96PZ0 661 aaKnown RBP6.64□□□□□ -1.35
CCDC171-207ENST00000478913 SOX7Q9BT81 388 aa6.64□□□□□ -1.35
CCDC171-207ENST00000478913 EVLQ9UI08 416 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-207ENST00000478913 OTOL1A6NHN0 477 aaPredicted RBP6.63□□□□□ -1.35
CCDC171-207ENST00000478913 DAPK3O43293 454 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 SEC24DO94855 1032 aaPredicted RBP6.63□□□□□ -1.35
CCDC171-207ENST00000478913 METP08581 1390 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 HNRNPLP14866 589 aaKnown RBP eCLIP6.63□□□□□ -1.35
CCDC171-207ENST00000478913 CNR2P34972 360 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 CDK17Q00537 523 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms