RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 CACNA1EQ15878 2313 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 XYLBO75191 536 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 RHOP08100 348 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 SDSP20132 328 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 CSRP1P21291 193 aaKnown RBP13.78□□□□□ -0.2
HDAC8-217ENST00000478743 ANTXR2P58335 489 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 IMMTQ16891 758 aaKnown RBP13.78□□□□□ -0.2
HDAC8-217ENST00000478743 USP41Q3LFD5 358 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 PLK5Q496M5 336 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 PLA2G4DQ86XP0 818 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 LRIG1Q96JA1 1093 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 CEP89Q96ST8 783 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 PAAF1Q9BRP4 392 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 TRMT61BQ9BVS5 477 aaKnown RBP13.78□□□□□ -0.2
HDAC8-217ENST00000478743 DUSP15Q9H1R2 295 aaPredicted RBP13.78□□□□□ -0.2
HDAC8-217ENST00000478743 SEC63Q9UGP8 760 aaKnown RBP13.78□□□□□ -0.2
HDAC8-217ENST00000478743 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 PLXNB3Q9ULL4 1909 aa13.78□□□□□ -0.2
HDAC8-217ENST00000478743 ARL5CA6NH57 179 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 SLC38A8A6NNN8 435 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 PATE3B3GLJ2 98 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 ADAMTS3O15072 1205 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 DCLK1O15075 740 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 KALRNO60229 2985 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 RXRAP19793 462 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 HOXA6P31267 233 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 VIPR2P41587 438 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 CCR2P41597 374 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 FGD1P98174 961 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 TARBP2Q15633 366 aaKnown RBP13.77□□□□□ -0.21
HDAC8-217ENST00000478743 AXDND1Q5T1B0 1012 aaPredicted RBP13.77□□□□□ -0.21
HDAC8-217ENST00000478743 DAB2IPQ5VWQ8 1189 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 CWC27Q6UX04 472 aaKnown RBP13.77□□□□□ -0.21
HDAC8-217ENST00000478743 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 GLIS3Q8NEA6 775 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 LNX1Q8TBB1 728 aaPredicted RBP13.77□□□□□ -0.21
HDAC8-217ENST00000478743 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 EIF2AQ9BY44 585 aaKnown RBP13.77□□□□□ -0.21
HDAC8-217ENST00000478743 MINDY3Q9H8M7 445 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 KANSL3Q9P2N6 904 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 ADAM28Q9UKQ2 775 aa13.77□□□□□ -0.21
HDAC8-217ENST00000478743 ATG2BQ96BY7 2078 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 EIF4E1BA6NMX2 242 aaKnown RBP13.76□□□□□ -0.21
HDAC8-217ENST00000478743 IPO5O00410 1097 aaKnown RBP13.76□□□□□ -0.21
HDAC8-217ENST00000478743 SEC24BO95487 1268 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 PLA2G2AP14555 144 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 HOXA11P31270 313 aaPredicted RBP13.76□□□□□ -0.21
HDAC8-217ENST00000478743 CREB5Q02930 508 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 SCAPQ12770 1279 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 PSMD5Q16401 504 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 UAP1L1Q3KQV9 507 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 PRSS36Q5K4E3 855 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 RHPN2Q8IUC4 686 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 CHCHD4Q8N4Q1 142 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 TTC8Q8TAM2 541 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 RSPRY1Q96DX4 576 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 ASB16Q96NS5 453 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 DSCC1Q9BVC3 393 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 GDE1Q9NZC3 331 aa13.76□□□□□ -0.21
HDAC8-217ENST00000478743 PSAPP07602 524 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 POU2F2P09086 479 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 SREBF1P36956 1147 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 FAM193AP78312 1265 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 LRRC32Q14392 662 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 MTERF2Q49AM1 385 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 WWC2Q6AWC2 1192 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF746Q6NUN9 644 aaPredicted RBP13.75□□□□□ -0.21
HDAC8-217ENST00000478743 HEATR3Q7Z4Q2 680 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 CATIPQ7Z7H3 387 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF710Q8N1W2 664 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 GSTCDQ8NEC7 633 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 IRF7Q92985 503 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 ZC3H10Q96K80 434 aaKnown RBP13.75□□□□□ -0.21
HDAC8-217ENST00000478743 FAM167AQ96KS9 214 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 MKNK1Q9BUB5 465 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 ZFP14Q9HCL3 533 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 IPPQ9Y573 584 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 PCDHA10Q9Y5I2 948 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 HECTD1Q9ULT8 2610 aa13.75□□□□□ -0.21
HDAC8-217ENST00000478743 KIAA1549LQ6ZVL6 1849 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 BCLAF3A2AJT9 711 aaKnown RBP13.74□□□□□ -0.21
HDAC8-217ENST00000478743 WDR27A2RRH5 827 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 CAVIN2O95810 425 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 ITGA4P13612 1032 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-217ENST00000478743 MFAP1P55081 439 aaKnown RBP13.74□□□□□ -0.21
HDAC8-217ENST00000478743 CEP57Q86XR8 500 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 GPR65Q8IYL9 337 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 ZNF577Q9BSK1 485 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 COLEC11Q9BWP8 271 aa13.74□□□□□ -0.21
HDAC8-217ENST00000478743 APOL6Q9BWW8 343 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms