RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 C7orf25Q9BPX7 421 aa7.5□□□□□ -1.21
CDK13-204ENST00000478563 XYLT2Q9H1B5 865 aa7.5□□□□□ -1.21
CDK13-204ENST00000478563 KIAA1586Q9HCI6 787 aa7.5□□□□□ -1.21
CDK13-204ENST00000478563 SWAP70Q9UH65 585 aa7.5□□□□□ -1.21
CDK13-204ENST00000478563 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 H3BUI4 141 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 SLC16A6O15403 523 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 PHGDHO43175 533 aaKnown RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 FRS3O43559 492 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 RPLP2P05387 115 aaKnown RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 XPAP23025 273 aaPredicted RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 GPR15P49685 360 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 HK3P52790 923 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 MGAT2Q10469 447 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 NOGQ13253 232 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 CCDC38Q502W7 563 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 TLDC1Q6P9B6 456 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 CNKSR3Q6P9H4 555 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 LVRNQ6Q4G3 990 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 PRRT2Q7Z6L0 340 aaPredicted RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 RHOT1Q8IXI2 618 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 NSUN6Q8TEA1 469 aaKnown RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 CDC5LQ99459 802 aaKnown RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 PITHD1Q9GZP4 211 aaPredicted RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 MYLK2Q9H1R3 596 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 TMPRSS5Q9H3S3 457 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 INCENPQ9NQS7 918 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 RBM12Q9NTZ6 932 aaKnown RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 LMBRD1Q9NUN5 540 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 DBR1Q9UK59 544 aaKnown RBP7.49□□□□□ -1.21
CDK13-204ENST00000478563 PCDHA3Q9Y5H8 950 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 USP19O94966 1318 aa7.49□□□□□ -1.21
CDK13-204ENST00000478563 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
CDK13-204ENST00000478563 MAFGO15525 162 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 AGR2O95994 175 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 LRG1P02750 347 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 CYBBP04839 570 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 COL6A1P12109 1028 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 TECP42680 631 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 MAPK9P45984 424 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 ZNF200P98182 395 aaPredicted RBP7.48□□□□□ -1.21
CDK13-204ENST00000478563 MGAT5Q09328 741 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 SEPT2Q15019 361 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 HIBCHQ6NVY1 386 aaPredicted RBP7.48□□□□□ -1.21
CDK13-204ENST00000478563 ZC3H14Q6PJT7 736 aaKnown RBP7.48□□□□□ -1.21
CDK13-204ENST00000478563 PAQR3Q6TCH7 311 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 SH2D3CQ8N5H7 860 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 CCDC33Q8N5R6 958 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 TP53I13Q8NBR0 393 aaPredicted RBP7.48□□□□□ -1.21
CDK13-204ENST00000478563 IL31RAQ8NI17 732 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 ARL8AQ96BM9 186 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 SLC35A4Q96G79 324 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 HIST1H2AHQ96KK5 128 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 HIST1H2AJQ99878 128 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 PTPN18Q99952 460 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 ZNF287Q9HBT7 754 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 AGO4Q9HCK5 861 aaKnown RBP7.48□□□□□ -1.21
CDK13-204ENST00000478563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDK13-204ENST00000478563 DTLQ9NZJ0 730 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 RBPJLQ9UBG7 517 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.48□□□□□ -1.21
CDK13-204ENST00000478563 OGDHLQ9ULD0 1010 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 PADI4Q9UM07 663 aa7.48□□□□□ -1.21
CDK13-204ENST00000478563 A0A1W2PPL8 197 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 FOXN3O00409 490 aaPredicted RBP7.47□□□□□ -1.21
CDK13-204ENST00000478563 NRP2O60462 931 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 KITP10721 976 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 TSHRP16473 764 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 RPL17P18621 184 aaKnown RBP7.47□□□□□ -1.21
CDK13-204ENST00000478563 SLC7A1P30825 629 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 NKX6-1P78426 367 aaPredicted RBP7.47□□□□□ -1.21
CDK13-204ENST00000478563 CAP1Q01518 475 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 ICA1Q05084 483 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 SIM2Q14190 667 aaPredicted RBP7.47□□□□□ -1.21
CDK13-204ENST00000478563 VMACQ2NL98 169 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 GLB1L2Q8IW92 636 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 C3orf20Q8ND61 904 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 MTFMTQ96DP5 389 aaKnown RBP7.47□□□□□ -1.21
CDK13-204ENST00000478563 FDXACB1Q9BRP7 624 aaPredicted RBP7.47□□□□□ -1.21
CDK13-204ENST00000478563 PNPLA8Q9NP80 782 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 GALNT8Q9NY28 637 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 CPA4Q9UI42 421 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 GPR52Q9Y2T5 361 aa7.47□□□□□ -1.21
CDK13-204ENST00000478563 ZNF839A8K0R7 811 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 FAM171A2A8MVW0 826 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 PRRT4C9JH25 899 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 DDX3XO00571 662 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDK13-204ENST00000478563 ADAMTS3O15072 1205 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 APEX1P27695 318 aaKnown RBP7.46□□□□□ -1.22
CDK13-204ENST00000478563 NRG3P56975 720 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 PMS2P11Q13670 270 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 BLMHQ13867 455 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 PLS1Q14651 629 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 STARD3Q14849 445 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 PUM3Q15397 648 aaKnown RBP7.46□□□□□ -1.22
CDK13-204ENST00000478563 PRR16Q569H4 304 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 CCDC178Q5BJE1 867 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 JAKMIP3Q5VZ66 844 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 GGT6Q6P531 493 aa7.46□□□□□ -1.22
CDK13-204ENST00000478563 HEATR3Q7Z4Q2 680 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms