RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TUSC3Q13454 348 aa14.37□□□□□ -0.11
ABCF3-212ENST00000478288 HSP90AA2PQ14568 343 aaPredicted RBP14.37□□□□□ -0.11
ABCF3-212ENST00000478288 SAFBQ15424 915 aaKnown RBP eCLIP14.37□□□□□ -0.11
ABCF3-212ENST00000478288 SMG7Q92540 1137 aaKnown RBP14.37□□□□□ -0.11
ABCF3-212ENST00000478288 APOL6Q9BWW8 343 aa14.37□□□□□ -0.11
ABCF3-212ENST00000478288 NT5C3AQ9H0P0 336 aa14.37□□□□□ -0.11
ABCF3-212ENST00000478288 TMEM60Q9H2L4 133 aa14.37□□□□□ -0.11
ABCF3-212ENST00000478288 WNT16Q9UBV4 365 aa14.37□□□□□ -0.11
ABCF3-212ENST00000478288 DMXL1Q9Y485 3027 aa14.37□□□□□ -0.11
ABCF3-212ENST00000478288 OTOGLQ3ZCN5 2332 aa14.37□□□□□ -0.11
ABCF3-212ENST00000478288 CACNA1IQ9P0X4 2223 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 RFPL2O75678 378 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 NEFLP07196 543 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 ATP2B1P20020 1258 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 NAMPTP43490 491 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 NEK4P51957 841 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 CCDC105Q8IYK2 499 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 ERMNQ8TAM6 284 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 PIK3R5Q8WYR1 880 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 PRKD2Q9BZL6 878 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 CCDC113Q9H0I3 377 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 PDZD7Q9H5P4 517 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 GPRC5CQ9NQ84 441 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 PARP2Q9UGN5 583 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 FBXL21Q9UKT6 434 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 ZFP37Q9Y6Q3 630 aaPredicted RBP14.36□□□□□ -0.11
ABCF3-212ENST00000478288 FANCMQ8IYD8 2048 aa14.36□□□□□ -0.11
ABCF3-212ENST00000478288 ACKR2O00590 384 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 MED24O75448 989 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 TADA2AO75478 443 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 POU2F2P09086 479 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 OR52Z1P0C646 297 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 SRFP11831 508 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 CYP11B2P19099 503 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 HOXA9P31269 272 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 GBP2P32456 591 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-212ENST00000478288 MCM7P33993 719 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 ST3GAL1Q11201 340 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 ELAVL2Q12926 359 aaKnown RBP14.35□□□□□ -0.11
ABCF3-212ENST00000478288 PRPF4BQ13523 1007 aaKnown RBP14.35□□□□□ -0.11
ABCF3-212ENST00000478288 PPP2R5AQ15172 486 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 MAPK6Q16659 721 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 HAUS3Q68CZ6 603 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 FLCNQ8NFG4 579 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 RIN2Q8WYP3 895 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-212ENST00000478288 MYADMQ96S97 322 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 ADPGKQ9BRR6 497 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 LLPHQ9BRT6 129 aaKnown RBP14.35□□□□□ -0.11
ABCF3-212ENST00000478288 FOXP1Q9H334 677 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-212ENST00000478288 KLK14Q9P0G3 267 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 FBXW11Q9UKB1 542 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 CITO14578 2027 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 CEP250Q9BV73 2442 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 MYH15Q9Y2K3 1946 aa14.35□□□□□ -0.11
ABCF3-212ENST00000478288 PRR23AA6NEV1 266 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 ANHXE9PGG2 379 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 TMEM189-UBE2V1I3L0A0 370 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 PTGESO14684 152 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 ZMYND10O75800 440 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 RECQL4O94761 1208 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 KIF4AO95239 1232 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 THP07101 528 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 HNRNPA1P09651 372 aaKnown RBP eCLIP14.34□□□□□ -0.11
ABCF3-212ENST00000478288 LAMP2P13473 410 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 TRAPPC10P48553 1259 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 RBM25P49756 843 aaKnown RBP14.34□□□□□ -0.11
ABCF3-212ENST00000478288 EFNA5P52803 228 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 NAB2Q15742 525 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 DCAF4L1Q3SXM0 396 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 RTP2Q5QGT7 225 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 ERICH6BQ5W0A0 696 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 POTEGQ6S5H5 508 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 PADI6Q6TGC4 694 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 CDR2LQ86X02 465 aaPredicted RBP14.34□□□□□ -0.11
ABCF3-212ENST00000478288 PALB2Q86YC2 1186 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 SIX5Q8N196 739 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 B3GALT6Q96L58 329 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 TTPALQ9BTX7 342 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 PIDD1Q9HB75 910 aa14.34□□□□□ -0.11
ABCF3-212ENST00000478288 F5P12259 2224 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 NOTCH4Q99466 2003 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 ARHGEF35A5YM69 484 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 PRKCBP05771 671 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
ABCF3-212ENST00000478288 MAEAQ7L5Y9 396 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 ASCL5Q7RTU5 278 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 SLC44A3Q8N4M1 653 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 DTWD2Q8NBA8 298 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 DEPTORQ8TB45 409 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 LNX1Q8TBB1 728 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-212ENST00000478288 BSNDQ8WZ55 320 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 KIFAP3Q92845 792 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 C8orf76Q96K31 380 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 CLSTN3Q9BQT9 956 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 PAAF1Q9BRP4 392 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 SLC2A4RGQ9NR83 387 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 SNTG2Q9NY99 539 aa14.33□□□□□ -0.12
ABCF3-212ENST00000478288 STK24Q9Y6E0 443 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms