RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-222ENST00000478095 LAG3P18627 525 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 PROZP22891 400 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 GTF2BQ00403 316 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 RNASELQ05823 741 aaKnown RBP11.25□□□□□ -0.61
HDAC6-222ENST00000478095 KCNA1Q09470 495 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 GPM6BQ13491 265 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 ZNF280BQ86YH2 543 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 MICALL1Q8N3F8 863 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 KLHL23Q8NBE8 558 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 COLGALT1Q8NBJ5 622 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 URGCPQ8TCY9 931 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 SAMD11Q96NU1 681 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 ALG13Q9NP73 1137 aaKnown RBP11.25□□□□□ -0.61
HDAC6-222ENST00000478095 UBN1Q9NPG3 1134 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 OLFML3Q9NRN5 406 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 MIOSQ9NXC5 875 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 CHD7Q9P2D1 2997 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 DNAJB4Q9UDY4 337 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 RWDD3Q9Y3V2 267 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 LOXHD1Q8IVV2 1947 aa11.25□□□□□ -0.61
HDAC6-222ENST00000478095 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 ANKRD63C9JTQ0 380 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 C5orf67F2Z3F1 127 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 H3BNC9 293 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 GRM6O15303 877 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 CLDN3O15551 220 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 DDHD2O94830 711 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 PRPF6O94906 941 aaKnown RBP11.24□□□□□ -0.61
HDAC6-222ENST00000478095 MCF2P10911 925 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
HDAC6-222ENST00000478095 CSPP1Q1MSJ5 1256 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 L1TD1Q5T7N2 865 aaKnown RBP11.24□□□□□ -0.61
HDAC6-222ENST00000478095 CNNM4Q6P4Q7 775 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 SLC39A4Q6P5W5 647 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 KCNT2Q6UVM3 1135 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 ZPBP2Q6X784 338 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 KRBA2Q6ZNG9 492 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 UNC13DQ70J99 1090 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-222ENST00000478095 PPM1EQ8WY54 764 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 KCNN1Q92952 543 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 ZNF558Q96NG5 402 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 C11orf84Q9BUA3 381 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-222ENST00000478095 HAPLN2Q9GZV7 340 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 ST6GALNAC4Q9H4F1 302 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 NRDE2Q9H7Z3 1164 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 AAASQ9NRG9 546 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 USP25Q9UHP3 1055 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 PLAGL2Q9UPG8 496 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 GIT1Q9Y2X7 761 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 PCDHB12Q9Y5F1 795 aa11.24□□□□□ -0.61
HDAC6-222ENST00000478095 KLRC4O43908 158 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 FGF18O76093 207 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 PIGRP01833 764 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 ITGB1P05556 798 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 RB1P06400 928 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 SCP2P22307 547 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 GRM5P41594 1212 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 SLC11A1P49279 550 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 BCAR1P56945 870 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 MCL1Q07820 350 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 CCDC85BQ15834 202 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-222ENST00000478095 GLRA4Q5JXX5 417 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 FAM26FQ5R3K3 315 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 ZBTB41Q5SVQ8 909 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 TMEM173Q86WV6 379 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-222ENST00000478095 FMR1NBQ8N0W7 255 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-222ENST00000478095 SLC17A8Q8NDX2 589 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 GSTCDQ8NEC7 633 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 HVCN1Q96D96 273 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 FAM193BQ96PV7 902 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-222ENST00000478095 ACCSQ96QU6 501 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 MSTO1Q9BUK6 570 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 CCDC94Q9BW85 323 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-222ENST00000478095 STRA6Q9BX79 667 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 SLC39A2Q9NP94 309 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 EXOC1Q9NV70 894 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 CACNG4Q9UBN1 327 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 STXBP5LQ9Y2K9 1186 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 MTCH2Q9Y6C9 303 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 GBF1Q92538 1859 aa11.23□□□□□ -0.61
HDAC6-222ENST00000478095 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 PTGESO14684 152 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 INPPL1O15357 1258 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 MEFVO15553 781 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-222ENST00000478095 NR1I2O75469 434 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 GALTP07902 379 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 DNAJB1P25685 340 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 ABCD1P33897 745 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 TNFSF9P41273 254 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 OR1G1P47890 313 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 ALDH7A1P49419 539 aaKnown RBP11.22□□□□□ -0.61
HDAC6-222ENST00000478095 YARSP54577 528 aaKnown RBP11.22□□□□□ -0.61
HDAC6-222ENST00000478095 FAM160A1Q05DH4 1040 aa11.22□□□□□ -0.61
HDAC6-222ENST00000478095 EHHADHQ08426 723 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms