RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 FTLP02792 175 aaPredicted RBP13.15□□□□□ -0.3
PTPRF-212ENST00000477970 CTNNA2P26232 953 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 NAMPTP43490 491 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 LMAN1P49257 510 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 FMO1Q01740 532 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 PRPF4BQ13523 1007 aaKnown RBP13.15□□□□□ -0.3
PTPRF-212ENST00000477970 DCAF12L1Q5VU92 463 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 DNAAF5Q86Y56 855 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 RIOX2Q8IUF8 465 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 GOLPH3Q9H4A6 298 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 RFC5P40937 340 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
PTPRF-212ENST00000477970 PCDHB18PQ96TA0 734 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 POLR3FQ9H1D9 316 aaPredicted RBP13.15□□□□□ -0.3
PTPRF-212ENST00000477970 WNT8AQ9H1J5 351 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 PORCNQ9H237 461 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 FAM114A2Q9NRY5 505 aa13.15□□□□□ -0.3
PTPRF-212ENST00000477970 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
PTPRF-212ENST00000477970 USP2O75604 605 aaPredicted RBP13.15□□□□□ -0.31
PTPRF-212ENST00000477970 SGPL1O95470 568 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 OATP04181 439 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 IVLP07476 585 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 ARL2P36404 184 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.31
PTPRF-212ENST00000477970 EMC2Q15006 297 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 UBL4BQ8N7F7 174 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 PIK3R5Q8WYR1 880 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 CD101Q93033 1021 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 SNCAIPQ9Y6H5 919 aa13.15□□□□□ -0.31
PTPRF-212ENST00000477970 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 FAM187AA6NFU0 413 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 ZNF233A6NK53 670 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
PTPRF-212ENST00000477970 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 CYP11B1P15538 503 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 ABCB4P21439 1286 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 SKOR1P84550 965 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 DHX34Q14147 1143 aaKnown RBP13.14□□□□□ -0.31
PTPRF-212ENST00000477970 SLFN12LQ6IEE8 588 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 PSPC1Q8WXF1 523 aaKnown RBP13.14□□□□□ -0.31
PTPRF-212ENST00000477970 SAAL1Q96ER3 474 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 ZIM3Q96PE6 472 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 ZNF302Q9NR11 478 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 GOLGA8JA6NMD2 632 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 PDE6CP51160 858 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 DNA2P51530 1060 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 ALDH5A1P51649 535 aaPredicted RBP13.14□□□□□ -0.31
PTPRF-212ENST00000477970 DRG2P55039 364 aaKnown RBP13.14□□□□□ -0.31
PTPRF-212ENST00000477970 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 SV2AQ7L0J3 742 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 SAPCD2Q86UD0 394 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 LRRC45Q96CN5 670 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 RNPC3Q96LT9 517 aaKnown RBP13.14□□□□□ -0.31
PTPRF-212ENST00000477970 GDAP1L1Q96MZ0 367 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 RUNDC3BQ96NL0 473 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 ZSWIM1Q9BR11 485 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 KIFC3Q9BVG8 833 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 ALG6Q9Y672 507 aa13.14□□□□□ -0.31
PTPRF-212ENST00000477970 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 IRF6O14896 467 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 HNRNPDLO14979 420 aaKnown RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 LDHAP00338 332 aaKnown RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 ATP4AP20648 1035 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 ZSCAN5CA6NGD5 496 aaPredicted RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 CAPN2P17655 700 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 PEX5P50542 639 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 TARBP2Q15633 366 aaKnown RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 CFAP58Q5T655 872 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 ACAD10Q6JQN1 1059 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 PPP1R2P3Q6NXS1 205 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 PPM1KQ8N3J5 372 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 KAT5Q92993 513 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 RAB17Q9H0T7 212 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 GBA2Q9HCG7 927 aaPredicted RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 AVENQ9NQS1 362 aaPredicted RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 CWC15Q9P013 229 aaKnown RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 MYBL1P10243 752 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 TGFB3P10600 412 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 GBP1P32455 592 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 CTNNA1P35221 906 aaKnown RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 MRPS25P82663 173 aaKnown RBP13.13□□□□□ -0.31
PTPRF-212ENST00000477970 SP2Q02086 613 aa13.13□□□□□ -0.31
PTPRF-212ENST00000477970 GRM1Q13255 1194 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms