RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 GPM6BQ13491 265 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 DHX8Q14562 1220 aaKnown RBP10.74□□□□□ -0.69
NIFK-205ENST00000477693 STX1AQ16623 288 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 PTPROQ16827 1216 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 COLGALT1Q8NBJ5 622 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 TMEM161BQ8NDZ6 487 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 MRPL38Q96DV4 380 aaKnown RBP10.74□□□□□ -0.69
NIFK-205ENST00000477693 ADPGKQ9BRR6 497 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 TRIM9Q9C026 710 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 TRIM6Q9C030 488 aaPredicted RBP10.74□□□□□ -0.69
NIFK-205ENST00000477693 LMAN2LQ9H0V9 348 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 GZF1Q9H116 711 aaPredicted RBP10.74□□□□□ -0.69
NIFK-205ENST00000477693 TSPY26PQ9H489 355 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 PARVGQ9HBI0 331 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 HCSTQ9UBK5 93 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 PLAGL2Q9UPG8 496 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 TNFSF13BQ9Y275 285 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 PCDHB12Q9Y5F1 795 aa10.74□□□□□ -0.69
NIFK-205ENST00000477693 REV3LO60673 3130 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 KIAA1671Q9BY89 1806 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 PRUNE2Q8WUY3 3088 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 CARNS1A5YM72 827 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 SNPHO15079 494 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 SLC16A4O15374 487 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 FAM13AO94988 1023 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 NPTXRO95502 500 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 RPN1P04843 607 aaKnown RBP10.73□□□□□ -0.69
NIFK-205ENST00000477693 ITGB1P05556 798 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
NIFK-205ENST00000477693 ITGA4P13612 1032 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 GAP43P17677 238 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 NLRP12P59046 1061 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 DCAF4L1Q3SXM0 396 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 COBLL1Q53SF7 1204 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 NOMO2Q5JPE7 1267 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 SPOUT1Q5T280 376 aaKnown RBP10.73□□□□□ -0.69
NIFK-205ENST00000477693 ATF7IP2Q5U623 682 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 CDR2LQ86X02 465 aaPredicted RBP10.73□□□□□ -0.69
NIFK-205ENST00000477693 CCDC65Q8IXS2 484 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 KLHL23Q8NBE8 558 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 DDX12PQ92771 950 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 FAM122AQ96E09 287 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 FIZ1Q96SL8 496 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 ACO2Q99798 780 aaKnown RBP10.73□□□□□ -0.69
NIFK-205ENST00000477693 BPIFA3Q9BQP9 254 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 FUCA2Q9BTY2 467 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 MRPL4Q9BYD3 311 aaKnown RBP10.73□□□□□ -0.69
NIFK-205ENST00000477693 NXF3Q9H4D5 531 aaKnown RBP10.73□□□□□ -0.69
NIFK-205ENST00000477693 TBC1D13Q9NVG8 400 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 KANSL3Q9P2N6 904 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 SEL1LQ9UBV2 794 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 GIT1Q9Y2X7 761 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 HES2Q9Y543 173 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 TCHHQ07283 1943 aa10.73□□□□□ -0.69
NIFK-205ENST00000477693 NCOR1O75376 2440 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 ARL5CA6NH57 179 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 MYMKA6NI61 221 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 TNFRSF10AO00220 468 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 GRM6O15303 877 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 TBCAO75347 108 aaKnown RBP10.72□□□□□ -0.69
NIFK-205ENST00000477693 RHOBTB3O94955 611 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 KRT18P05783 430 aaKnown RBP10.72□□□□□ -0.69
NIFK-205ENST00000477693 PROZP22891 400 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 PPM1AP35813 382 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 MLH1P40692 756 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 AFMP43652 599 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 AFF1P51825 1210 aaKnown RBP10.72□□□□□ -0.69
NIFK-205ENST00000477693 PLCB3Q01970 1234 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 UBE3AQ05086 875 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 TYRO3Q06418 890 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 PNOCQ13519 176 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 STIM1Q13586 685 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 MORC3Q14149 939 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 TIGD5Q53EQ6 642 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 FOXR2Q6PJQ5 311 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 KCNT2Q6UVM3 1135 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 UNC13DQ70J99 1090 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 APBB1IPQ7Z5R6 666 aaPredicted RBP10.72□□□□□ -0.69
NIFK-205ENST00000477693 MYCT1Q8N699 235 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 SPPL3Q8TCT6 385 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 URGCPQ8TCY9 931 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 DNAJC19Q96DA6 116 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 ST6GALNAC4Q9H4F1 302 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 PTPRHQ9HD43 1115 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 LZTS1Q9Y250 596 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 INPP5FQ9Y2H2 1132 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 USP20Q9Y2K6 914 aa10.72□□□□□ -0.69
NIFK-205ENST00000477693 FRMD3A2A2Y4 597 aa10.71□□□□□ -0.69
NIFK-205ENST00000477693 ABLIM1O14639 778 aa10.71□□□□□ -0.69
NIFK-205ENST00000477693 ZC3H11AO75152 810 aaKnown RBP eCLIP10.71□□□□□ -0.69
NIFK-205ENST00000477693 FGF18O76093 207 aa10.71□□□□□ -0.69
NIFK-205ENST00000477693 AKAP5P24588 427 aa10.71□□□□□ -0.69
NIFK-205ENST00000477693 ERCC5P28715 1186 aaPredicted RBP10.71□□□□□ -0.69
NIFK-205ENST00000477693 PLA2G5P39877 138 aa10.71□□□□□ -0.69
NIFK-205ENST00000477693 ALDH7A1P49419 539 aaKnown RBP10.71□□□□□ -0.69
NIFK-205ENST00000477693 BCAR1P56945 870 aa10.71□□□□□ -0.69
NIFK-205ENST00000477693 ASIC1P78348 528 aa10.71□□□□□ -0.69
NIFK-205ENST00000477693 RNASELQ05823 741 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms