RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 NRIP1P48552 1158 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 KRT17Q04695 432 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 GRIK3Q13003 919 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 SEZ6Q53EL9 994 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 GLRA4Q5JXX5 417 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 KCNN1Q92952 543 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 TCHPQ9BT92 498 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 IKZF4Q9H2S9 585 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 GDPD2Q9HCC8 539 aa24.5■■□□□ 1.51
SF1-214ENST00000477596 PUF60Q9UHX1 559 aaKnown RBP24.5■■□□□ 1.51
SF1-214ENST00000477596 HIDE1A8MVS5 230 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 PER2O15055 1255 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 MEFVO15553 781 aaPredicted RBP24.49■■□□□ 1.51
SF1-214ENST00000477596 TOM1L1O75674 476 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 MCF2P10911 925 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 KCNQ1P51787 676 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 NOLC1Q14978 699 aaKnown RBP eCLIP24.49■■□□□ 1.51
SF1-214ENST00000477596 COL19A1Q14993 1142 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 ZPBP2Q6X784 338 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 EP400NLQ6ZTU2 488 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 AUTS2Q8WXX7 1259 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 FGFBP2Q9BYJ0 223 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 KBTBD4Q9NVX7 518 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 CLDND1Q9NY35 253 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 COG5Q9UP83 839 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 FAN1Q9Y2M0 1017 aa24.49■■□□□ 1.51
SF1-214ENST00000477596 KCNA5P22460 613 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 GTF2BQ00403 316 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 TPRNQ4KMQ1 711 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 SLC39A4Q6P5W5 647 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 TMC7Q7Z402 723 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 APBB1IPQ7Z5R6 666 aaPredicted RBP24.48■■□□□ 1.51
SF1-214ENST00000477596 VPS52Q8N1B4 723 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 IQUBQ8NA54 791 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 ATXN2LQ8WWM7 1075 aaKnown RBP24.48■■□□□ 1.51
SF1-214ENST00000477596 PABPC5Q96DU9 382 aaKnown RBP24.48■■□□□ 1.51
SF1-214ENST00000477596 PAAF1Q9BRP4 392 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 ZBP1Q9H171 429 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 TNMDQ9H2S6 317 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 FAM13BQ9NYF5 915 aa24.48■■□□□ 1.51
SF1-214ENST00000477596 VCANP13611 3396 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 FRMD3A2A2Y4 597 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 CASTOR2A6NHX0 329 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 TISP43B9A030 160 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 H3BQ06 376 aaPredicted RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 HNRNPDLO14979 420 aaKnown RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 ALDH2P05091 517 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 CASP1P29466 404 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 LIG4P49917 911 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 CASP5P51878 434 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 MRPS5P82675 430 aaKnown RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 RBM10P98175 930 aaKnown RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 DLX2Q07687 328 aaPredicted RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 NAB2Q15742 525 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 DDX53Q86TM3 631 aaKnown RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 MAP4K3Q8IVH8 894 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 ASB2Q96Q27 587 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 CCDC94Q9BW85 323 aaPredicted RBP24.47■■□□□ 1.51
SF1-214ENST00000477596 CUEDC2Q9H467 287 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 PANK4Q9NVE7 773 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 ATP6V1DQ9Y5K8 247 aa24.47■■□□□ 1.51
SF1-214ENST00000477596 CITO14578 2027 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.46■■□□□ 1.51
SF1-214ENST00000477596 TBX10O75333 385 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 PPP1R37O75864 691 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 PIGRP01833 764 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 GAP43P17677 238 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 CA8P35219 290 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 LTBRP36941 435 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 MATR3P43243 847 aaKnown RBP eCLIP24.46■■□□□ 1.51
SF1-214ENST00000477596 MCL1Q07820 350 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 ZBTB41Q5SVQ8 909 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 ZNF720Q7Z2F6 126 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 GRAMD1CQ8IYS0 662 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 HPS3Q969F9 1004 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 SNX27Q96L92 541 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 TRIM9Q9C026 710 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 ST6GALNAC4Q9H4F1 302 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 TLE6Q9H808 572 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 MRPL44Q9H9J2 332 aaKnown RBP24.46■■□□□ 1.51
SF1-214ENST00000477596 KCNH3Q9ULD8 1083 aa24.46■■□□□ 1.51
SF1-214ENST00000477596 A0A1B0GVL5 298 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 ANKRD63C9JTQ0 380 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 CLDN3O15551 220 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 GLP2RO95838 553 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 THP07101 528 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 MYBP10242 640 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 PFKFB1P16118 471 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 KCNA1Q09470 495 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 COASYQ13057 564 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 TUSC3Q13454 348 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 DUSP6Q16828 381 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 CTC1Q2NKJ3 1217 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 HERC4Q5GLZ8 1057 aaPredicted RBP24.45■■□□□ 1.5
SF1-214ENST00000477596 VN1R2Q8NFZ6 395 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 PPP1R10Q96QC0 940 aaKnown RBP24.45■■□□□ 1.5
SF1-214ENST00000477596 STRA6Q9BX79 667 aa24.45■■□□□ 1.5
SF1-214ENST00000477596 NGRNQ9NPE2 291 aaKnown RBP24.45■■□□□ 1.5
SF1-214ENST00000477596 SEL1LQ9UBV2 794 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms