RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 MST1LQ2TV78 715 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 Q6ZVL8 140 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 PDZD4Q76G19 769 aaPredicted RBP6.27□□□□□ -1.41
VPS50-213ENST00000477572 TRMT2AQ8IZ69 625 aaKnown RBP6.27□□□□□ -1.41
VPS50-213ENST00000477572 AUTS2Q8WXX7 1259 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 DCLRE1CQ96SD1 692 aaKnown RBP6.27□□□□□ -1.41
VPS50-213ENST00000477572 IFT122Q9HBG6 1241 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 CHST2Q9Y4C5 530 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 USP15Q9Y4E8 981 aaPredicted RBP6.27□□□□□ -1.41
VPS50-213ENST00000477572 RNASET2O00584 256 aaKnown RBP6.26□□□□□ -1.41
VPS50-213ENST00000477572 BRINP1O60477 761 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 ZSCAN20P17040 1043 aaPredicted RBP6.26□□□□□ -1.41
VPS50-213ENST00000477572 CRHR1P34998 444 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 CHN2P52757 468 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 ADRM1Q16186 407 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 MUM1Q2TAK8 710 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 GPR156Q8NFN8 814 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 MYEOVQ96EZ4 313 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 UHRF1Q96T88 793 aaPredicted RBP6.26□□□□□ -1.41
VPS50-213ENST00000477572 ACE2Q9BYF1 805 aaPredicted RBP6.26□□□□□ -1.41
VPS50-213ENST00000477572 FAM126AQ9BYI3 521 aaPredicted RBP6.26□□□□□ -1.41
VPS50-213ENST00000477572 WDR11Q9BZH6 1224 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 CLCA2Q9UQC9 943 aa6.26□□□□□ -1.41
VPS50-213ENST00000477572 CXorf49A8MYA2 514 aaPredicted RBP6.25□□□□□ -1.41
VPS50-213ENST00000477572 PRKD3O94806 890 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 RBP3P10745 1247 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 OSMP13725 252 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 BMP5P22003 454 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 PROZP22891 400 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 ECHS1P30084 290 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 PER3P56645 1201 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 NANOS3P60323 173 aaKnown RBP6.25□□□□□ -1.41
VPS50-213ENST00000477572 MRPS9P82933 396 aaKnown RBP6.25□□□□□ -1.41
VPS50-213ENST00000477572 COL10A1Q03692 680 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 NOMO1Q15155 1222 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 DRICH1Q6PGQ1 229 aaPredicted RBP6.25□□□□□ -1.41
VPS50-213ENST00000477572 KCNK18Q7Z418 384 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 BEND2Q8NDZ0 799 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 AHCYL2Q96HN2 611 aaKnown RBP6.25□□□□□ -1.41
VPS50-213ENST00000477572 SLC2A13Q96QE2 648 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 NEU1Q99519 415 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 DNAJC28Q9NX36 388 aa6.25□□□□□ -1.41
VPS50-213ENST00000477572 GRID2IPA4D2P6 1211 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 PHF2O75151 1096 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 EYA4O95677 639 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 GSPT1P15170 499 aaKnown RBP6.24□□□□□ -1.41
VPS50-213ENST00000477572 FLT3LGP49771 235 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 MUM1L1Q5H9M0 696 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 FAM47AQ5JRC9 791 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 ATXN7L2Q5T6C5 722 aaPredicted RBP6.24□□□□□ -1.41
VPS50-213ENST00000477572 FAM102AQ5T9C2 384 aaPredicted RBP6.24□□□□□ -1.41
VPS50-213ENST00000477572 DNAJC10Q8IXB1 793 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 CMTR2Q8IYT2 770 aaKnown RBP6.24□□□□□ -1.41
VPS50-213ENST00000477572 PQLC1Q8N2U9 271 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 CPEB3Q8NE35 698 aaKnown RBP6.24□□□□□ -1.41
VPS50-213ENST00000477572 OR7D4Q8NG98 312 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 ZFP28Q8NHY6 868 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 FATE1Q969F0 183 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 PAWRQ96IZ0 340 aaKnown RBP6.24□□□□□ -1.41
VPS50-213ENST00000477572 SERHL2Q9H4I8 314 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 CYP4F11Q9HBI6 524 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 PNPLA7Q6ZV29 1317 aa6.24□□□□□ -1.41
VPS50-213ENST00000477572 DRGXA6NNA5 263 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 B3GALT2O43825 422 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 RAP2AP10114 183 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 MGAT1P26572 445 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 SREBF1P36956 1147 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 ZEB1P37275 1124 aaPredicted RBP6.23□□□□□ -1.41
VPS50-213ENST00000477572 GPR3P46089 330 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 CLRN1P58418 232 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 PPP3CAQ08209 521 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 BEAN1Q3B7T3 259 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 HECTD2Q5U5R9 776 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 AFMIDQ63HM1 303 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 METRNLQ641Q3 311 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 MED25Q71SY5 747 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 PLXDC1Q8IUK5 500 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 WDR66Q8TBY9 1149 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 GREM2Q9H772 168 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 CCM2LQ9NUG4 571 aaPredicted RBP6.23□□□□□ -1.41
VPS50-213ENST00000477572 ZBTB21Q9ULJ3 1066 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 PCDHGA2Q9Y5H1 932 aa6.23□□□□□ -1.41
VPS50-213ENST00000477572 ATRNL1Q5VV63 1379 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 TMEM200CA6NKL6 621 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 GPR39O43194 453 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 MTHFD2P13995 350 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 ALOX15P16050 662 aaPredicted RBP6.22□□□□□ -1.41
VPS50-213ENST00000477572 TSHZ3Q63HK5 1081 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 ZNF572Q7Z3I7 529 aaPredicted RBP6.22□□□□□ -1.41
VPS50-213ENST00000477572 LCORLQ8N3X6 602 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 ATL2Q8NHH9 583 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 ORAI2Q96SN7 254 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 MRI1Q9BV20 369 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 ADI1Q9BV57 179 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 SENP6Q9GZR1 1112 aaPredicted RBP6.22□□□□□ -1.41
VPS50-213ENST00000477572 RBM12Q9NTZ6 932 aaKnown RBP6.22□□□□□ -1.41
VPS50-213ENST00000477572 SCOCQ9UIL1 159 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 PACSIN3Q9UKS6 424 aa6.22□□□□□ -1.41
VPS50-213ENST00000477572 GAGE12BA1L429 117 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms