RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	ADCY9	O60503	1353 aa		5.16	□□□□□ -1.58
PTCD3-212	ENST00000477520	LRRC37A3	O60309	1634 aa		5.15	□□□□□ -1.58
PTCD3-212	ENST00000477520	BCL9	O00512	1426 aa		5.15	□□□□□ -1.58
PTCD3-212	ENST00000477520	FAM237A	A0A1B0GTK4	181 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ANKRD65	E5RJM6	399 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	AGPS	O00116	658 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	RNF8	O76064	485 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZNF202	O95125	648 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ANP32D	O95626	131 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	BAG3	O95817	575 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	PAEP	P09466	180 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	RHOXF2B	P0C7M4	288 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	RPL10	P27635	214 aa	Known RBP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ERCC5	P28715	1186 aa	Predicted RBP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CASP14	P31944	242 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	VAV2	P52735	878 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZNF131	P52739	623 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	RBM5	P52756	815 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	SESN3	P58005	492 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CCT2	P78371	535 aa	Known RBP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	KRT83	P78385	493 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	AMPD2	Q01433	879 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	PDE4B	Q07343	736 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	MAP3K12	Q12852	859 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ITIH4	Q14624	930 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	KIR3DS1	Q14943	382 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	USH1G	Q495M9	461 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ANKRD20A8P	Q5CZ79	823 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZNF569	Q5MCW4	686 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CFAP58	Q5T655	872 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	GKAP1	Q5VSY0	366 aa	Predicted RBP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ALG1L	Q6GMV1	187 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	AGMO	Q6ZNB7	445 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	SEPT14	Q6ZU15	432 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CEP128	Q6ZU80	1094 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	TRAPPC11	Q7Z392	1133 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	SDR16C5	Q8N3Y7	309 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	TC2N	Q8N9U0	490 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	FAM13C	Q8NE31	585 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	WDR66	Q8TBY9	1149 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	MYCBPAP	Q8TBZ2	947 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CAGE1	Q8TC20	777 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	AEN	Q8WTP8	325 aa	Known RBP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	IRGQ	Q8WZA9	623 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CENPT	Q96BT3	561 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	MAP6	Q96JE9	813 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	KREMEN1	Q96MU8	473 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	IWS1	Q96ST2	819 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	RHOXF2	Q9BQY4	288 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	TSGA10	Q9BZW7	698 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	MAF1	Q9H063	256 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZWILCH	Q9H900	591 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CNOT10	Q9H9A5	744 aa	Known RBP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	SLC52A2	Q9HAB3	445 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	SLC39A2	Q9NP94	309 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	BABAM1	Q9NWV8	329 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	TMOD3	Q9NYL9	352 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	CTTNBP2NL	Q9P2B4	639 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	KLHL14	Q9P2G3	628 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ATXN10	Q9UBB4	475 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ABCF2	Q9UG63	623 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	PUF60	Q9UHX1	559 aa	Known RBP	5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZNF148	Q9UQR1	794 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	RIPOR2	Q9Y4F9	1068 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	SAR1B	Q9Y6B6	198 aa		5.15	□□□□□ -1.59
PTCD3-212	ENST00000477520	SCN11A	Q9UI33	1791 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	BRWD3	Q6RI45	1802 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	GPR75-ASB3	A0A0A6YYF3	556 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	TMEM82	A0PJX8	343 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	EME2	A4GXA9	379 aa	Predicted RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	IFIT3	O14879	490 aa	Known RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	PPIP5K2	O43314	1243 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	TMCC1	O94876	653 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	HARS	P12081	509 aa	Known RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	TFE3	P19532	575 aa	Predicted RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	RPS6KB1	P23443	525 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	GBP1	P32455	592 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	ME1	P48163	572 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	ELF3	P78545	371 aa	Predicted RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	SPAG1	Q07617	926 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	KIF5A	Q12840	1032 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	IFT88	Q13099	833 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	CCDC85B	Q15834	202 aa	Predicted RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	SLC14A2	Q15849	920 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	IMMT	Q16891	758 aa	Known RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	KBTBD12	Q3ZCT8	623 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	CCDC92	Q53HC0	331 aa	Predicted RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	SPDYC	Q5MJ68	293 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	CYP26C1	Q6V0L0	522 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	MCM10	Q7L590	875 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	FAM228A	Q86W67	206 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	LDHD	Q86WU2	507 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	MYLK4	Q86YV6	388 aa	Predicted RBP	5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	CCDC65	Q8IXS2	484 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	TTC5	Q8N0Z6	440 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	CCDC63	Q8NA47	563 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	SMYD1	Q8NB12	490 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	IL17RE	Q8NFR9	667 aa		5.14	□□□□□ -1.59
PTCD3-212	ENST00000477520	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.14	□□□□□ -1.59

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