RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 HDAC7Q8WUI4 952 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 ATRIPQ8WXE1 791 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 ING5Q8WYH8 240 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 CCDC51Q96ER9 411 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 RPP25Q9BUL9 199 aaKnown RBP7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 PHF20Q9BVI0 1012 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 GPR62Q9BZJ7 368 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 CSRNP2Q9H175 543 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 RXFP1Q9HBX9 757 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 SLC2A4RGQ9NR83 387 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 USP18Q9UMW8 372 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 DMXL1Q9Y485 3027 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 CITO14578 2027 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 NOTCH4Q99466 2003 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 DCHS1Q96JQ0 3298 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 KIF26AQ9ULI4 1882 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 FAM170BA6NMN3 283 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 ANHXE9PGG2 379 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 B4GALT5O43286 388 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 USO1O60763 962 aaKnown RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 DTNBO60941 627 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 XYLBO75191 536 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 GLULP15104 373 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 XBP1P17861 261 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 ARF4P18085 180 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 HSPA4P34932 840 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 PTENP60484 403 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 PFKPQ01813 784 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 MBTD1Q05BQ5 628 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 CAPSQ13938 189 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 EPHA7Q15375 998 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 VARS2Q5ST30 1063 aaKnown RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 SLC27A1Q6PCB7 646 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 TSSK4Q6SA08 328 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 MOXD1Q6UVY6 613 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 B3GNT9Q6UX72 402 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 TPRG1Q6ZUI0 275 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 PIK3AP1Q6ZUJ8 805 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 C4orf19Q8IY42 314 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 RNF168Q8IYW5 571 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 DAGLBQ8NCG7 672 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 ITFG1Q8TB96 612 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 SLC7A14Q8TBB6 771 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 ASAP3Q8TDY4 903 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 FGF13Q92913 245 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 FAM20AQ96MK3 541 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 MBOAT7Q96N66 472 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 CNTNAP3BQ96NU0 1288 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 PAAF1Q9BRP4 392 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 TTPALQ9BTX7 342 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 CNTNAP3Q9BZ76 1288 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 POLR3FQ9H1D9 316 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 ZSWIM4Q9H7M6 989 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 CHST7Q9NS84 486 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 HCFC1R1Q9NWW0 138 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 DLGAP2Q9P1A6 1054 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 FNIP2Q9P278 1114 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 FBXW11Q9UKB1 542 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 CDV3Q9UKY7 258 aaKnown RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 CDH7Q9ULB5 785 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 PPME1Q9Y570 386 aa7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 ZFP37Q9Y6Q3 630 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-206ENST00000477485 MYH11P35749 1972 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 CEP250Q9BV73 2442 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 A0A087WWV3 80 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 SPTLC1O15269 473 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 KIF4AO95239 1232 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 HNRNPA1P09651 372 aaKnown RBP eCLIP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 GCFC2P16383 781 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 FOSBP53539 338 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 STARD6P59095 220 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 PRKCQQ04759 706 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 TUSC3Q13454 348 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 PCBP1Q15365 356 aaKnown RBP eCLIP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 LPAL2Q16609 132 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 PABPC1LQ4VXU2 614 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 SLC44A4Q53GD3 710 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 AXDND1Q5T1B0 1012 aaPredicted RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 GALNT17Q6IS24 598 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 RUFY3Q7L099 469 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 ZBTB8OSQ8IWT0 167 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 MCRS1Q96EZ8 462 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 NAP1L4Q99733 375 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 EIF2AK1Q9BQI3 630 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 RHOBTB2Q9BYZ6 727 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 KCNMB3Q9NPA1 279 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 XPNPEP1Q9NQW7 623 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 RAB23Q9ULC3 237 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 NDRG2Q9UN36 371 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 SMG5Q9UPR3 1016 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 MRPS23Q9Y3D9 190 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 MTF2Q9Y483 593 aaPredicted RBP7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 CYP46A1Q9Y6A2 500 aa7.4□□□□□ -1.22
RTFDC1-206ENST00000477485 OTOGLQ3ZCN5 2332 aa7.4□□□□□ -1.23
RTFDC1-206ENST00000477485 FRYLO94915 3013 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 M0R2N6 131 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 NCAM2O15394 837 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 DGAT1O75907 488 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms