RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 REXO2Q9Y3B8 237 aaKnown RBP15.69■□□□□ 0.1
COL4A6-206ENST00000477085 ADGRG1Q9Y653 693 aa15.69■□□□□ 0.1
COL4A6-206ENST00000477085 P4HA2O15460 535 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 MEFVO15553 781 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-206ENST00000477085 TSPAN1O60635 241 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 LDHAP00338 332 aaKnown RBP15.68■□□□□ 0.1
COL4A6-206ENST00000477085 ASGR1P07306 291 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 ARF4P18085 180 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-206ENST00000477085 JAM2P57087 298 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 CDK17Q00537 523 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 ZNF410Q86VK4 478 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 TMEM192Q8IY95 271 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 ELMO3Q96BJ8 720 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 GPR88Q9GZN0 384 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 PDZD7Q9H5P4 517 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 NHEJ1Q9H9Q4 299 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-206ENST00000477085 TMEM8AQ9HCN3 771 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
COL4A6-206ENST00000477085 FBXL5Q9UKA1 691 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 CPSF3Q9UKF6 684 aaKnown RBP15.68■□□□□ 0.1
COL4A6-206ENST00000477085 COQ4Q9Y3A0 265 aa15.68■□□□□ 0.1
COL4A6-206ENST00000477085 OGTO15294 1046 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 ZEB2O60315 1214 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 C4BPAP04003 597 aaKnown RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 INHAP05111 366 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 PNMA6AP0CW24 399 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 MXI1P50539 228 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 TSR1Q2NL82 804 aaKnown RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 LHX8Q68G74 356 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 GDF6Q6KF10 455 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 IRF2BP2Q7Z5L9 587 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 ARHGEF19Q8IW93 802 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 ACRBPQ8NEB7 543 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 TAS1R2Q8TE23 839 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 TMEM40Q8WWA1 233 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 SYN2Q92777 582 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 CDT1Q9H211 546 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 SPC25Q9HBM1 224 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 AIPL1Q9NZN9 384 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 GINS2Q9Y248 185 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 EPN1Q9Y6I3 576 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 CST5P28325 142 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-206ENST00000477085 GTF2H1P32780 548 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 ZNF568Q3ZCX4 644 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 KRT39Q6A163 491 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 NYAP1Q6ZVC0 841 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 SRGAP1Q7Z6B7 1085 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 WNT8BQ93098 351 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 OSMRQ99650 979 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 APEX2Q9UBZ4 518 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 GTF2IRD1Q9UHL9 959 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 DNAJC12Q9UKB3 198 aa15.67■□□□□ 0.1
COL4A6-206ENST00000477085 CEP350Q5VT06 3117 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 ZNF263O14978 683 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 N4BP1O75113 896 aaKnown RBP15.66■□□□□ 0.1
COL4A6-206ENST00000477085 NDUFA10O95299 355 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 ABL1P00519 1130 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 HOXA11P31270 313 aaPredicted RBP15.66■□□□□ 0.1
COL4A6-206ENST00000477085 ASTE1Q2TB18 679 aaPredicted RBP15.66■□□□□ 0.1
COL4A6-206ENST00000477085 SFMBT2Q5VUG0 894 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 TDRD10Q5VZ19 366 aaKnown RBP15.66■□□□□ 0.1
COL4A6-206ENST00000477085 BRSK2Q8IWQ3 736 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 THNSL1Q8IYQ7 743 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 OR5B17Q8NGF7 314 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 PRIMPOLQ96LW4 560 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 C16orf45Q96MC5 204 aaPredicted RBP15.66■□□□□ 0.1
COL4A6-206ENST00000477085 SCLT1Q96NL6 688 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 ZNHIT6Q9NWK9 470 aaKnown RBP15.66■□□□□ 0.1
COL4A6-206ENST00000477085 PTCH2Q9Y6C5 1203 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 SCN10AQ9Y5Y9 1956 aa15.66■□□□□ 0.1
COL4A6-206ENST00000477085 A0A1B0GUA9 196 aa15.65■□□□□ 0.1
COL4A6-206ENST00000477085 VNN1O95497 513 aa15.65■□□□□ 0.1
COL4A6-206ENST00000477085 DARSP14868 501 aaKnown RBP15.65■□□□□ 0.1
COL4A6-206ENST00000477085 EIF4A3P38919 411 aaKnown RBP15.65■□□□□ 0.1
COL4A6-206ENST00000477085 OSTNP61366 133 aa15.65■□□□□ 0.1
COL4A6-206ENST00000477085 RAPGEF1Q13905 1077 aa15.65■□□□□ 0.1
COL4A6-206ENST00000477085 ENOX2Q16206 610 aaKnown RBP15.65■□□□□ 0.1
COL4A6-206ENST00000477085 ZACNQ401N2 412 aa15.65■□□□□ 0.1
COL4A6-206ENST00000477085 KAT5Q92993 513 aa15.65■□□□□ 0.1
COL4A6-206ENST00000477085 KAT6AQ92794 2004 aa15.65■□□□□ 0.1
COL4A6-206ENST00000477085 TRIP12Q14669 1992 aaPredicted RBP15.65■□□□□ 0.1
COL4A6-206ENST00000477085 GNAT1P11488 350 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 TNNI1P19237 187 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 ARID5AQ03989 594 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 DRAP1Q14919 205 aaPredicted RBP15.64■□□□□ 0.1
COL4A6-206ENST00000477085 SLAIN1Q8ND83 568 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 FNBP1Q96RU3 617 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 CGRRF1Q99675 332 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 PI4K2AQ9BTU6 479 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 STK33Q9BYT3 514 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 GCOM2Q9BZD3 368 aaPredicted RBP15.64■□□□□ 0.1
COL4A6-206ENST00000477085 NUCKS1Q9H1E3 243 aaKnown RBP15.64■□□□□ 0.1
COL4A6-206ENST00000477085 RAB20Q9NX57 234 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 TFR2Q9UP52 801 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 TRIM17Q9Y577 477 aa15.64■□□□□ 0.1
COL4A6-206ENST00000477085 F8VZ95 297 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 EIF4BP23588 611 aaKnown RBP15.64■□□□□ 0.09
COL4A6-206ENST00000477085 GRK4P32298 578 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms