RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 IGSF10Q6WRI0 2623 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
SMG5-204ENST00000476954 MAN2B1O00754 1011 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 XYLBO75191 536 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 CHRNB1P11230 501 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 FCARP24071 287 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 DNM2P50570 870 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 LONP2Q86WA8 852 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 APOL6Q9BWW8 343 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 NIFKQ9BYG3 293 aaKnown RBP17.2■□□□□ 0.34
SMG5-204ENST00000476954 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 UNC45AQ9H3U1 944 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 BRD9Q9H8M2 597 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 RBM12Q9NTZ6 932 aaKnown RBP17.2■□□□□ 0.34
SMG5-204ENST00000476954 ADAM28Q9UKQ2 775 aa17.2■□□□□ 0.34
SMG5-204ENST00000476954 MRPS23Q9Y3D9 190 aaKnown RBP17.2■□□□□ 0.34
SMG5-204ENST00000476954 HELZ2Q9BYK8 2649 aaKnown RBP17.2■□□□□ 0.34
SMG5-204ENST00000476954 ZNF806P0C7X5 589 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 CEBPBP17676 345 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 SETQ01105 290 aaPredicted RBP17.19■□□□□ 0.34
SMG5-204ENST00000476954 Q6ZS52 159 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 GPR65Q8IYL9 337 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 HASPINQ8TF76 798 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 GATA6Q92908 595 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 PAAF1Q9BRP4 392 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 IER2Q9BTL4 223 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 ADAM33Q9BZ11 813 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 PIAS3Q9Y6X2 628 aa17.19■□□□□ 0.34
SMG5-204ENST00000476954 V9GY48 417 aaPredicted RBP17.19■□□□□ 0.34
SMG5-204ENST00000476954 MAFO75444 373 aaPredicted RBP17.18■□□□□ 0.34
SMG5-204ENST00000476954 HOXA9P31269 272 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 CNR2P34972 360 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 NOVA1P51513 510 aaKnown RBP17.18■□□□□ 0.34
SMG5-204ENST00000476954 FUT2Q10981 343 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 PSMD5Q16401 504 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 WDR44Q5JSH3 913 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 AXDND1Q5T1B0 1012 aaPredicted RBP17.18■□□□□ 0.34
SMG5-204ENST00000476954 TCEAL6Q6IPX3 200 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 CEP57Q86XR8 500 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 GSTCDQ8NEC7 633 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 LNX1Q8TBB1 728 aaPredicted RBP17.18■□□□□ 0.34
SMG5-204ENST00000476954 TCEAL3Q969E4 200 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 ELSPBP1Q96BH3 223 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 BARHL2Q9NY43 387 aa17.18■□□□□ 0.34
SMG5-204ENST00000476954 MAST4O15021 2626 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 ASH1LQ9NR48 2969 aaKnown RBP17.17■□□□□ 0.34
SMG5-204ENST00000476954 TAF4O00268 1085 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 MSH4O15457 936 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 EDIL3O43854 480 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 NR1I2O75469 434 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 TADA2AO75478 443 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 SRGAP2CP0DJJ0 459 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 CREMQ03060 361 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 ZNF252P-AS1Q0IIN9 211 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 XKR3Q5GH77 459 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 PLA2G4FQ68DD2 849 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 CHD1LQ86WJ1 897 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 SPEM1Q8N4L4 309 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 ZCCHC14Q8WYQ9 949 aaKnown RBP17.17■□□□□ 0.34
SMG5-204ENST00000476954 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 COL4A3BPQ9Y5P4 624 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 EML5Q05BV3 1969 aa17.17■□□□□ 0.34
SMG5-204ENST00000476954 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 EPN2O95208 641 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 CCNE1P24864 410 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 FAM78AQ5JUQ0 283 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 FAM171A1Q5VUB5 890 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 TEX2Q8IWB9 1127 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 TMTC2Q8N394 836 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 ZNF579Q8NAF0 562 aaKnown RBP17.16■□□□□ 0.34
SMG5-204ENST00000476954 PIK3R5Q8WYR1 880 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 CPB2Q96IY4 423 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 ZNF334Q9HCZ1 680 aaPredicted RBP17.16■□□□□ 0.34
SMG5-204ENST00000476954 GDE1Q9NZC3 331 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
SMG5-204ENST00000476954 DMXL2Q8TDJ6 3036 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 TMEM8BA6NDV4 472 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 GAS7O60861 476 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 RHOP08100 348 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 AKAP5P24588 427 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 GDI1P31150 447 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 MCM5P33992 734 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 LIFRP42702 1097 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 JAK3P52333 1124 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 PTGDRQ13258 359 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 RNF43Q68DV7 783 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 ANO5Q75V66 913 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 KBTBD6Q86V97 674 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 MAP4K3Q8IVH8 894 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 CNNM3Q8NE01 707 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 PRPF31Q8WWY3 499 aaKnown RBP17.15■□□□□ 0.34
SMG5-204ENST00000476954 TMEM143Q96AN5 459 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 TCEAL4Q96EI5 215 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 TTPALQ9BTX7 342 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms