RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PLA2G4FQ68DD2 849 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 SHC3Q92529 594 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 CDHR1Q96JP9 859 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 TSPYL1Q9H0U9 437 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 SYNGAP1Q96PV0 1343 aa17.71■□□□□ 0.43
TMEM53-208ENST00000476724 TMEM150BA6NC51 233 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 GOLGA6L10A6NI86 522 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 EIF3HO15372 352 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMEM53-208ENST00000476724 STAM2O75886 525 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 CYP2C8P10632 490 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 KCNA2P16389 499 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 ADSSP30520 456 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 DCAF12L1Q5VU92 463 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 KDM7AQ6ZMT4 941 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 SRLQ86TD4 932 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 MCPH1Q8NEM0 835 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 EPS8L1Q8TE68 723 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 FAM81BQ96LP2 452 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 MFSD14AQ96MC6 490 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 SH2D3AQ9BRG2 576 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 FBXO40Q9UH90 709 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 NOCTQ9UK39 431 aaKnown RBP17.7■□□□□ 0.42
TMEM53-208ENST00000476724 PLAAQ9Y263 795 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 NFASCO94856 1347 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 DENND3A2RUS2 1198 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 SOWAHBA6NEL2 793 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 FAM187AA6NFU0 413 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 ANKRD63C9JTQ0 380 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 H0YCG3 227 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 SORBS3O60504 671 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 DGAT1O75907 488 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 PSAPP07602 524 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 OSBPP22059 807 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 ALDH5A1P51649 535 aaPredicted RBP17.7■□□□□ 0.42
TMEM53-208ENST00000476724 DHX34Q14147 1143 aaKnown RBP17.7■□□□□ 0.42
TMEM53-208ENST00000476724 SPDYCQ5MJ68 293 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 CBWD2Q8IUF1 395 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 PPM1KQ8N3J5 372 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 CEP170P1Q96L14 293 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 ATP6V1G3Q96LB4 118 aa17.7■□□□□ 0.42
TMEM53-208ENST00000476724 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMEM53-208ENST00000476724 LRRC37A2A6NM11 1700 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 GOLGA8IPA6NC78 632 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 GOLGA8JA6NMD2 632 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 TTI1O43156 1089 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 GGPS1O95749 300 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 HSD17B3P37058 310 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 USP8P40818 1118 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 GNGT1P63211 74 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 MAP2K1Q02750 393 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-208ENST00000476724 TRMT1LQ7Z2T5 733 aaKnown RBP17.69■□□□□ 0.42
TMEM53-208ENST00000476724 ZSWIM2Q8NEG5 633 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 DNERQ8NFT8 737 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 NT5C1BQ96P26 610 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 WNT8AQ9H1J5 351 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 GBA2Q9HCG7 927 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-208ENST00000476724 NMRK2Q9NPI5 230 aa17.69■□□□□ 0.42
TMEM53-208ENST00000476724 ZNFX1Q9P2E3 1918 aaKnown RBP17.69■□□□□ 0.42
TMEM53-208ENST00000476724 DAPK3O43293 454 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 SGPL1O95470 568 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 GARTP22102 1010 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 PRPF4BQ13523 1007 aaKnown RBP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 BRDTQ58F21 947 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 RUFY4Q6ZNE9 571 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 EFCAB13Q8IY85 973 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 FBXL13Q8NEE6 735 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 MS4A4AQ96JQ5 239 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 KREMEN1Q96MU8 473 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 TMBIM4Q9HC24 238 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 GABBR1Q9UBS5 961 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 RSPH14Q9UHP6 348 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 RRP15Q9Y3B9 282 aaKnown RBP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 CELF2O95319 508 aaKnown RBP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 CHRNB2P17787 502 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 SP2Q02086 613 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 DNAJC21Q5F1R6 531 aaKnown RBP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 CEP85LQ5SZL2 805 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 ENOSF1Q7L5Y1 443 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 NOP9Q86U38 636 aaKnown RBP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 DDX42Q86XP3 938 aaKnown RBP eCLIP17.68■□□□□ 0.42
TMEM53-208ENST00000476724 PCDHB18PQ96TA0 734 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 PDLIM7Q9NR12 457 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 RAB20Q9NX57 234 aa17.68■□□□□ 0.42
TMEM53-208ENST00000476724 SPATA31C2B4DYI2 1134 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 CYP26A1O43174 497 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ERLIN2O94905 339 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 STBD1O95210 358 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 PGK2P07205 417 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 SCP2P22307 547 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 DR1Q01658 176 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 SP4Q02446 784 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 STXBP2Q15833 593 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 GPD1LQ8N335 351 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ARFGAP2Q8N6H7 521 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 HELQQ8TDG4 1101 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
TMEM53-208ENST00000476724 POMGNT1Q8WZA1 660 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 SEMA4DQ92854 862 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms