RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 IL10RAQ13651 578 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 NOMO1Q15155 1222 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 TAF12Q16514 161 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 CBLL1Q75N03 491 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 OTOP2Q7RTS6 562 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 LDHDQ86WU2 507 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 FAM129CQ86XR2 697 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 GORASP1Q9BQQ3 440 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 SOX7Q9BT81 388 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 LRFN3Q9BTN0 628 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 HAPLN2Q9GZV7 340 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 KMT5AQ9NQR1 393 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 KCND1Q9NSA2 647 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 RBM12Q9NTZ6 932 aaKnown RBP4.96□□□□□ -1.62
VPS13D-207ENST00000476169 SAE1Q9UBE0 346 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-207ENST00000476169 DNAI1Q9UI46 699 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 CROTQ9UKG9 612 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 TPCN1Q9ULQ1 816 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 GPR52Q9Y2T5 361 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 CFAP20Q9Y6A4 193 aaKnown RBP4.96□□□□□ -1.62
VPS13D-207ENST00000476169 IRS2Q9Y4H2 1338 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 SCO2A0A1W2PP80 73 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 POM121BA6NF01 834 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 RRN3P2A6NIE6 340 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 hCG_1984214I3L0E3 225 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 MBD4O95243 580 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 IL12RB1P42701 662 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 CDR1P51861 262 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 GPSM2P81274 684 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 PPP3CAQ08209 521 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 MGAT2Q10469 447 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 G3BP1Q13283 466 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS13D-207ENST00000476169 CCDC93Q567U6 631 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 PGBD2Q6P3X8 592 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 MAEAQ7L5Y9 396 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 SYTL1Q8IYJ3 562 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 NGDNQ8NEJ9 315 aaKnown RBP4.95□□□□□ -1.62
VPS13D-207ENST00000476169 KLHDC4Q8TBB5 520 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 PHKBQ93100 1093 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 RGMAQ96B86 450 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 WDR92Q96MX6 357 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 C7orf25Q9BPX7 421 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 LRRC27Q9C0I9 530 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 CNTD2Q9H8S5 307 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 ARMT1Q9H993 441 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 STARD7Q9NQZ5 370 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 PGAP2Q9UHJ9 254 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 POLG2Q9UHN1 485 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 FBXO10Q9UK96 956 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 STXBP5LQ9Y2K9 1186 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 PCDHA5Q9Y5H7 936 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 PCDHA13Q9Y5I0 950 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 NR2E3Q9Y5X4 410 aa4.95□□□□□ -1.62
VPS13D-207ENST00000476169 A0A0G2JNJ9 132 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 H0Y858 1186 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 NCAM2O15394 837 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 AKR1B10O60218 316 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 PRAMEF4O60810 478 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 ADAM23O75077 832 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 TMEM127O75204 238 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 FTLP02792 175 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 CSTBP04080 98 aaKnown RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 RPLP2P05387 115 aaKnown RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 MYF5P13349 255 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 CASP5P51878 434 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 AGFG1P52594 562 aaKnown RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 MEF2AQ02078 507 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 RTP5Q14D33 572 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 MAN2A1Q16706 1144 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 THEMIS2Q5TEJ8 643 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 ICE2Q659A1 982 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 TMEM200BQ69YZ2 307 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 FAAH2Q6GMR7 532 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 TMEM132EQ6IEE7 984 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 SWSAP1Q6NVH7 229 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 FAM180BQ6P0A1 224 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 SYDE1Q6ZW31 735 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 PDZD4Q76G19 769 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 COL23A1Q86Y22 540 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 RHOT1Q8IXI2 618 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 TTLL6Q8N841 843 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 ZNF527Q8NB42 609 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 GPR156Q8NFN8 814 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 OR2I1PQ8NGU4 316 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 ARL8AQ96BM9 186 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 TBC1D20Q96BZ9 403 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 ERP27Q96DN0 273 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 LIN37Q96GY3 246 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 PPM1MQ96MI6 270 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 C11orf84Q9BUA3 381 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 SLC26A6Q9BXS9 759 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 OSBPL6Q9BZF3 934 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 PNPLA8Q9NP80 782 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 Q9UFV3 132 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 STAP2Q9UGK3 403 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 MBD1Q9UIS9 605 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 OGDHLQ9ULD0 1010 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 ASAP1Q9ULH1 1129 aa4.94□□□□□ -1.62
VPS13D-207ENST00000476169 OAS3Q9Y6K5 1087 aaKnown RBP4.94□□□□□ -1.62
VPS13D-207ENST00000476169 A0A1W2PR48 441 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms