RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	FBXO48	Q5FWF7	155 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ARSH	Q5FYA8	562 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LDLRAD1	Q5T700	205 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	IFFO2	Q5TF58	517 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	C12orf60	Q5U649	245 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ATL3	Q6DD88	541 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC4A10	Q6U841	1118 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	OLFM4	Q6UX06	510 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	MFSD6	Q6ZSS7	791 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	BEND4	Q6ZU67	534 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LPCAT2	Q7L5N7	544 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PTF1A	Q7RTS3	328 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	COMTD1	Q86VU5	262 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	METTL16	Q86W50	562 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF677	Q86XU0	584 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GATAD2A	Q86YP4	633 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	MAP7D3	Q8IWC1	876 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CD302	Q8IX05	232 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CDH26	Q8IXH8	852 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CNTROB	Q8N137	903 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SIX5	Q8N196	739 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TCP11L2	Q8N4U5	519 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF565	Q8N9K5	539 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC4A11	Q8NBS3	891 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	OR10Z1	Q8NGY1	313 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TTC8	Q8TAM2	541 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	IFI44	Q8TCB0	444 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CALML6	Q8TD86	181 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC26A7	Q8TE54	656 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	DENND1A	Q8TEH3	1009 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GRK7	Q8WTQ7	553 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC9A6	Q92581	669 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TTC9	Q92623	222 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ZC3H10	Q96K80	434 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF570	Q96NI8	536 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	OLFM3	Q96PB7	478 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SRPK1	Q96SB4	655 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SELENOS	Q9BQE4	189 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CENPK	Q9BS16	269 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	C9orf16	Q9BUW7	83 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	NUP58	Q9BVL2	599 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	RHOBTB2	Q9BYZ6	727 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	MTMR12	Q9C0I1	747 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CCSER1	Q9C0I3	900 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	KIAA1683	Q9H0B3	1180 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LRRC19	Q9H756	370 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	FAM204A	Q9H8W3	233 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CRLF2	Q9HC73	371 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	NEK6	Q9HC98	313 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	VTA1	Q9NP79	307 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	C12orf4	Q9NQ89	552 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	WASH6P	Q9NQA3	447 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	DIABLO	Q9NR28	239 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GID8	Q9NWU2	228 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GPRC5B	Q9NZH0	403 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	STK17A	Q9UEE5	414 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PTBP2	Q9UKA9	531 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SOX13	Q9UN79	622 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SPG7	Q9UQ90	795 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	DNAJC16	Q9Y2G8	782 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TMX2	Q9Y320	296 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CBY1	Q9Y3M2	126 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	FARP1	Q9Y4F1	1045 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	NOX1	Q9Y5S8	564 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	STON1	Q9Y6Q2	735 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LRRC7	Q96NW7	1537 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TULP4	Q9NRJ4	1543 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ADGRB1	O14514	1584 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PIK3C2B	O00750	1634 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ITSN1	Q15811	1721 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	WNK3	Q9BYP7	1800 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM2-211	ENST00000475835		A0A1B0GWJ7	208 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	PVALEF	A0A1B0GWK0	134 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	FAM221A	A4D161	298 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	SH3D21	A4FU49	640 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	ANKRD34B	A5PLL1	514 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	CCDC69	A6NI79	296 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	LRRIQ4	A6NIV6	560 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	SLC9B1P1	A6NJY1	282 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	BECN2	A8MW95	431 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	TARM1	B6A8C7	271 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	STMND1	H3BQB6	276 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835		J3KRW8	73 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835		K7ELQ4	463 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	AXIN1	O15169	862 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	SPTLC1	O15269	473 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	NCK2	O43639	380 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	PIP5K1C	O60331	668 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	CLN5	O75503	358 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	CRTAP	O75718	401 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	TRIM16	O95361	564 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	OXSR1	O95747	527 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	ASL	P04424	464 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	ABCB1	P08183	1280 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	ITGA2B	P08514	1039 aa		4.09	□□□□□ -1.75
LSM2-211	ENST00000475835	KRT7	P08729	469 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms