RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PRPF4BQ13523 1007 aaKnown RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 FUT10Q6P4F1 479 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 RSPO2Q6UXX9 243 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 C15orf39Q6ZRI6 1047 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 KCNK18Q7Z418 384 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 ZBTB33Q86T24 672 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 UBALD2Q8IYN6 164 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 DAW1Q8N136 415 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 PLCD3Q8N3E9 789 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 TMEM105Q8N8V8 129 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 IGSF22Q8N9C0 903 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 TDRD5Q8NAT2 981 aaKnown RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 ST13P5Q8NFI4 369 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 LNX1Q8TBB1 728 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 HASPINQ8TF76 798 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 RSAD2Q8WXG1 361 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 RIN2Q8WYP3 895 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 PRIMPOLQ96LW4 560 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 CLSTN3Q9BQT9 956 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 COLEC11Q9BWP8 271 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 TRIM6Q9C030 488 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 NT5C3AQ9H0P0 336 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 PTPRHQ9HD43 1115 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 WDR6Q9NNW5 1121 aaKnown RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 PRMT7Q9NVM4 692 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-207ENST00000475549 ADAM28Q9UKQ2 775 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 KIAA1024Q9UPX6 916 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 ZNF318Q5VUA4 2279 aa7.76□□□□□ -1.17
HDAC3-207ENST00000475549 ZDBF2Q9HCK1 2354 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 ARHGEF35A5YM69 484 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 H0Y858 1186 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 NARSO43776 548 aaKnown RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 TADA2AO75478 443 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 RECQL4O94761 1208 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 GLUD1P00367 558 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 PRKCBP05771 671 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 PRR29P0C7W0 189 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 LIG1P18858 919 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 MUTP22033 750 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 NAMPTP43490 491 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 HMGN5P82970 282 aaKnown RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 MAPK7Q13164 816 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 ORC2Q13416 577 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 TUSC3Q13454 348 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 PDIA5Q14554 519 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 HSP90AA2PQ14568 343 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 MAPK6Q16659 721 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 USP41Q3LFD5 358 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 ALKAL1Q6UXT8 129 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 CCDC149Q6ZUS6 474 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 C1orf186Q6ZWK4 172 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 OTOP3Q7RTS5 596 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 GLYCTKQ8IVS8 523 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 SUGP1Q8IWZ8 645 aaKnown RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 GPR65Q8IYL9 337 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 DEPTORQ8TB45 409 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 ZSCAN31Q96LW9 406 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 CCDC43Q96MW1 224 aaKnown RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 MYADMQ96S97 322 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 RUSC1Q9BVN2 902 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 RHOBTB2Q9BYZ6 727 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 DDX19AQ9NUU7 478 aaKnown RBP7.75□□□□□ -1.17
HDAC3-207ENST00000475549 FAM86C1Q9NVL1 165 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 FNIP2Q9P278 1114 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 LRWD1Q9UFC0 647 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 SSX2IPQ9Y2D8 614 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 VPS13AQ96RL7 3174 aa7.75□□□□□ -1.17
HDAC3-207ENST00000475549 ZFHX2Q9C0A1 2572 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 WDR81Q562E7 1941 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 ZMYM2Q9UBW7 1377 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 SFI1A8K8P3 1242 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 ABLIM1O14639 778 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 N4BP3O15049 544 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 NR1I2O75469 434 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 C1RP00736 705 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 THP07101 528 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 LAMP2P13473 410 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 NPTX2P47972 431 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 CLCNKBP51801 687 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 PTPN5P54829 565 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 SOX4Q06945 474 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 TDGQ13569 410 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 XKR4Q5GH76 650 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 GLRA4Q5JXX5 417 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 ATF7IP2Q5U623 682 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 FAM171A1Q5VUB5 890 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 CWF19L1Q69YN2 538 aaKnown RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 RINT1Q6NUQ1 792 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 ZBTB8OSQ8IWT0 167 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 HACE1Q8IYU2 909 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 TMEM130Q8N3G9 435 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 SLC44A3Q8N4M1 653 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 CEP120Q8N960 986 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 C3orf58Q8NDZ4 430 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 ERMNQ8TAM6 284 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 HDAC7Q8WUI4 952 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 SMG7Q92540 1137 aaKnown RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 ZMAT2Q96NC0 199 aaKnown RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 PNMA5Q96PV4 448 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms