RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 KCNK18Q7Z418 384 aa17.4■□□□□ 0.38
CDPF1-205ENST00000474256 PAAF1Q9BRP4 392 aa17.4■□□□□ 0.38
CDPF1-205ENST00000474256 CXCL16Q9H2A7 254 aa17.4■□□□□ 0.38
CDPF1-205ENST00000474256 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
CDPF1-205ENST00000474256 USTQ9Y2C2 406 aa17.4■□□□□ 0.38
CDPF1-205ENST00000474256 K7ERI5 159 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 HIP1RO75146 1068 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 C1RP00736 705 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 THP07101 528 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 NPTX2P47972 431 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
CDPF1-205ENST00000474256 USP41Q3LFD5 358 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 C15orf39Q6ZRI6 1047 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 KCTD17Q8N5Z5 321 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 RABGGTAQ92696 567 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 ASIC4Q96FT7 647 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 B3GALT6Q96L58 329 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 RUSC1Q9BVN2 902 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 CACNG4Q9UBN1 327 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 SMC3Q9UQE7 1217 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 TNFSF13BQ9Y275 285 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.37
CDPF1-205ENST00000474256 TECTAO75443 2155 aa17.39■□□□□ 0.37
CDPF1-205ENST00000474256 CCDC169A6NNP5 214 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 TADA2AO75478 443 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 GLUD1P00367 558 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 PEX3P56589 373 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 MAPK7Q13164 816 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 DMP1Q13316 513 aaPredicted RBP17.38■□□□□ 0.37
CDPF1-205ENST00000474256 ARL6IP4Q66PJ3 421 aaKnown RBP17.38■□□□□ 0.37
CDPF1-205ENST00000474256 ZDHHC14Q8IZN3 488 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 CMASQ8NFW8 434 aaPredicted RBP17.38■□□□□ 0.37
CDPF1-205ENST00000474256 PBXIP1Q96AQ6 731 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 DRC1Q96MC2 740 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 PNMA5Q96PV4 448 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 KCNH6Q9H252 994 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 TMEM134Q9H6X4 195 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 C17orf75Q9HAS0 396 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 MAN1C1Q9NR34 630 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDPF1-205ENST00000474256 FNIP2Q9P278 1114 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 ARHGAP28Q9P2N2 729 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 DPP7Q9UHL4 492 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 PHLPP2Q6ZVD8 1323 aa17.38■□□□□ 0.37
CDPF1-205ENST00000474256 CASTOR2A6NHX0 329 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 PAPLNO95428 1278 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 GUCY2CP25092 1073 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
CDPF1-205ENST00000474256 TAS1R3Q7RTX0 852 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 PLCD3Q8N3E9 789 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 TDRD5Q8NAT2 981 aaKnown RBP17.37■□□□□ 0.37
CDPF1-205ENST00000474256 HDAC7Q8WUI4 952 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 ACO2Q99798 780 aaKnown RBP17.37■□□□□ 0.37
CDPF1-205ENST00000474256 NTPCRQ9BSD7 190 aaKnown RBP17.37■□□□□ 0.37
CDPF1-205ENST00000474256 TIPINQ9BVW5 301 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 RHOBTB2Q9BYZ6 727 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 NT5C3AQ9H0P0 336 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 PTPRHQ9HD43 1115 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 SORCS3Q9UPU3 1222 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 GDAQ9Y2T3 454 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 RBM19Q9Y4C8 960 aaKnown RBP17.37■□□□□ 0.37
CDPF1-205ENST00000474256 TRIOO75962 3097 aa17.37■□□□□ 0.37
CDPF1-205ENST00000474256 SF3B1O75533 1304 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDPF1-205ENST00000474256 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 KIF4AO95239 1232 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 CREMQ03060 361 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 LILRA6Q6PI73 481 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 CYP26C1Q6V0L0 522 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 APBB1IPQ7Z5R6 666 aaPredicted RBP17.36■□□□□ 0.37
CDPF1-205ENST00000474256 ZBTB33Q86T24 672 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 SYT2Q8N9I0 419 aaPredicted RBP17.36■□□□□ 0.37
CDPF1-205ENST00000474256 KREMEN2Q8NCW0 462 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 RIN2Q8WYP3 895 aaPredicted RBP17.36■□□□□ 0.37
CDPF1-205ENST00000474256 PPP1R10Q96QC0 940 aaKnown RBP17.36■□□□□ 0.37
CDPF1-205ENST00000474256 KMT5AQ9NQR1 393 aa17.36■□□□□ 0.37
CDPF1-205ENST00000474256 CCDC195A0A1B0GUA6 201 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 TGM5O43548 720 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 PROZP22891 400 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 SLC12A3P55017 1021 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 MTMR3Q13615 1198 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 ZRSR1Q15695 479 aaKnown RBP17.35■□□□□ 0.37
CDPF1-205ENST00000474256 TMEM119Q4V9L6 283 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 RTP2Q5QGT7 225 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 ELMSAN1Q6PJG2 1045 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 CCDC149Q6ZUS6 474 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 PALB2Q86YC2 1186 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 UBALD2Q8IYN6 164 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 HASPINQ8TF76 798 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 SPIRE2Q8WWL2 714 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 MRPL4Q9BYD3 311 aaKnown RBP17.35■□□□□ 0.37
CDPF1-205ENST00000474256 PLEKHA4Q9H4M7 779 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 KCND2Q9NZV8 630 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 LIMD1Q9UGP4 676 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 KCNG1Q9UIX4 513 aa17.35■□□□□ 0.37
CDPF1-205ENST00000474256 SFI1A8K8P3 1242 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 TMEM189-UBE2V1I3L0A0 370 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 ABLIM1O14639 778 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 RFPL2O75678 378 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 BRD1O95696 1058 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms