RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PPP3CAQ08209 521 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 EFEMP1Q12805 493 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 IL10RAQ13651 578 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 PUM1Q14671 1186 aaKnown RBP eCLIP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 PDCD2Q16342 344 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 ANO1Q5XXA6 986 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 PDZD4Q76G19 769 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 LDHDQ86WU2 507 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 BRIX1Q8TDN6 353 aaKnown RBP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 SLC35A4Q96G79 324 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 APIPQ96GX9 242 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 SUCLG2Q96I99 432 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 CLPTM1LQ96KA5 538 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 HERPUD2Q9BSE4 406 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 LRFN3Q9BTN0 628 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 C11orf84Q9BUA3 381 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 UBA5Q9GZZ9 404 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 C14orf93Q9H972 538 aaKnown RBP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 PPCSQ9HAB8 311 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 BCO1Q9HAY6 547 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 KIAA1586Q9HCI6 787 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 PNPLA8Q9NP80 782 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 SARS2Q9NP81 518 aaKnown RBP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 LANCL2Q9NS86 450 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 TMEM140Q9NV12 185 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 PCDHA13Q9Y5I0 950 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 A0A0A6YYK5 440 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-212ENST00000473961 ABHD14A-ACY1A0A1B0GW23 586 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 OTOL1A6NHN0 477 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-212ENST00000473961 ISM1B1AKI9 464 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 F5H423 210 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-212ENST00000473961 NRP1O14786 923 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 MYF5P13349 255 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 INSRRP14616 1297 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 POLD1P28340 1107 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 CRHR1P34998 444 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 ETV4P43268 484 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 DSC2Q02487 901 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 CD69Q07108 199 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 ADAM9Q13443 819 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 EIF4HQ15056 248 aaKnown RBP5.19□□□□□ -1.58
BRCA1-212ENST00000473961 MST1LQ2TV78 715 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 PRR16Q569H4 304 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 FAM83BQ5T0W9 1011 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 TCERG1LQ5VWI1 586 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 TRMT10BQ6PF06 316 aaKnown RBP5.19□□□□□ -1.58
BRCA1-212ENST00000473961 TAS1R1Q7RTX1 841 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 OR2C3Q8N628 320 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 PHKBQ93100 1093 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 TRIM63Q969Q1 353 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 SGCZQ96LD1 299 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 ZSWIM3Q96MP5 696 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 SCLT1Q96NL6 688 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 TBCBQ99426 244 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 NAP1L4Q99733 375 aaKnown RBP5.19□□□□□ -1.58
BRCA1-212ENST00000473961 SOX7Q9BT81 388 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 ZNF287Q9HBT7 754 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 STARD7Q9NQZ5 370 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 TRMT13Q9NUP7 481 aaKnown RBP5.19□□□□□ -1.58
BRCA1-212ENST00000473961 PNPOQ9NVS9 261 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 OGDHLQ9ULD0 1010 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 PAXBP1Q9Y5B6 917 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 ADAMTS20P59510 1910 aa5.19□□□□□ -1.58
BRCA1-212ENST00000473961 TEX51A0A1B0GUA7 166 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 TMEM127O75204 238 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 KNG1P01042 644 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 GAAP10253 952 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 GYPEP15421 78 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 ADSLP30566 484 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 THBS2P35442 1172 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 MC3RP41968 323 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 PPM1FP49593 454 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 SPATS1Q496A3 300 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 INO80DQ53TQ3 878 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 XRRA1Q6P2D8 792 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 REXO1L1PQ8IX06 675 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 SMAP1Q8IYB5 467 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 PQLC1Q8N2U9 271 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 LINC00482Q8N8I6 264 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 ANKRD42Q8N9B4 389 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 OR7D4Q8NG98 312 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 MZB1Q8WU39 189 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 GCDHQ92947 438 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 NKD2Q969F2 451 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 ZBTB8AQ96BR9 441 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 TMX3Q96JJ7 454 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 SAMD11Q96NU1 681 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 GORASP1Q9BQQ3 440 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 APOL5Q9BWW9 433 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 UNKQ9C0B0 810 aaKnown RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 SENP6Q9GZR1 1112 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 L2HGDHQ9H9P8 463 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 PIH1D1Q9NWS0 290 aaKnown RBP5.18□□□□□ -1.58
BRCA1-212ENST00000473961 ABCF2Q9UG63 623 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 PCDHB1Q9Y5F3 818 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 PCDHA5Q9Y5H7 936 aa5.18□□□□□ -1.58
BRCA1-212ENST00000473961 hCG_1642624A0A1W2PR95 340 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 N4BP3O15049 544 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 GPR32O75388 356 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms