RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 FNBP1Q96RU3 617 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 FDXACB1Q9BRP7 624 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 FAM49AQ9H0Q0 323 aaPredicted RBP6.74□□□□□ -1.33
CLK1-210ENST00000473565 ABHD16BQ9H3Z7 469 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 SETD4Q9NVD3 440 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 RAB20Q9NX57 234 aa6.74□□□□□ -1.33
CLK1-210ENST00000473565 FAM155AB1AL88 458 aaPredicted RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 MAPK13O15264 365 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 CLDN3O15551 220 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 N4BP1O75113 896 aaKnown RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 SGPL1O95470 568 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 SLC10A3P09131 477 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 ABCB4P21439 1286 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 SSTR3P32745 418 aaPredicted RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 MAPK6Q16659 721 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 CYP4F22Q6NT55 531 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 NFRKBQ6P4R8 1299 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 C17orf99Q6UX52 265 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 SLC47A2Q86VL8 602 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 ZBTB8OSQ8IWT0 167 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 FBXL13Q8NEE6 735 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 TCP11Q8WWU5 503 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 CPB2Q96IY4 423 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 ACO2Q99798 780 aaKnown RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 MYO6Q9UM54 1294 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 STYXL1Q9Y6J8 313 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 PASKQ96RG2 1323 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 TNPO2O14787 897 aaKnown RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 PJA2O43164 708 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 PALMO75781 387 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 VNN1O95497 513 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 TBC1D8O95759 1140 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 PIGRP01833 764 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 HLA-DRAP01903 254 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 MBTD1Q05BQ5 628 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 PPFIA1Q13136 1202 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 PRPF4BQ13523 1007 aaKnown RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 MXD4Q14582 209 aaPredicted RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 CDCA2Q69YH5 1023 aaPredicted RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 ZNF662Q6ZS27 426 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 TRAPPC11Q7Z392 1133 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 HELQQ8TDG4 1101 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 TMC2Q8TDI7 906 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 COG1Q8WTW3 980 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 MRPL4Q9BYD3 311 aaKnown RBP6.73□□□□□ -1.33
CLK1-210ENST00000473565 TSGA10Q9BZW7 698 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 TMEM134Q9H6X4 195 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 IFT122Q9HBG6 1241 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 MYO1AQ9UBC5 1043 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 CNTNAP2Q9UHC6 1331 aa6.73□□□□□ -1.33
CLK1-210ENST00000473565 LOC102724159A0A0B4J2E5 919 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 PDE2AO00408 941 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 ABLIM1O14639 778 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 FAM189A1O60320 539 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 PPFIA4O75335 1185 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 TACC1O75410 805 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 PIK3CAP42336 1068 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 NOP2P46087 812 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 SLC26A2P50443 739 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 MRPS25P82663 173 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 CAP1Q01518 475 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 HIC1Q14526 733 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 PSMD6Q15008 389 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 PWP2Q15269 919 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 NAB2Q15742 525 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 GRIK4Q16099 956 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 KCTD19Q17RG1 926 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 MARCH8Q5T0T0 291 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 NOP9Q86U38 636 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 ANKRD7Q92527 254 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 UBXN4Q92575 508 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 SCLT1Q96NL6 688 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 MMS19Q96T76 1030 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 SYT11Q9BT88 431 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 HYOU1Q9Y4L1 999 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 P4HA2O15460 535 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 TOM1L1O75674 476 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 C4BPAP04003 597 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 ZNF865P0CJ78 1059 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 KRT5P13647 590 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ZSCAN20P17040 1043 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 EFNA5P52803 228 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 GALCP54803 685 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 PTENP60484 403 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ZNF200P98182 395 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 KIZQ2M2Z5 673 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ZNF568Q3ZCX4 644 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ZNF484Q5JVG2 852 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ATF7IP2Q5U623 682 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 FBXO38Q6PIJ6 1188 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 MTHFD1LQ6UB35 978 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 C15orf39Q6ZRI6 1047 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 RPUSD2Q8IZ73 545 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 NOA1Q8NC60 698 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 EMID1Q96A84 441 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 ZBTB9Q96C00 473 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ARHGEF26Q96DR7 871 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 NT5C1BQ96P26 610 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 PCDHB18PQ96TA0 734 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 HINFPQ9BQA5 517 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms