RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 KRTCAP3Q53RY4 240 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 KAZNQ674X7 775 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 ALKBH5Q6P6C2 394 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 LMBR1LQ6UX01 489 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 NPNTQ6UXI9 565 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 LIX1LQ8IVB5 337 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 CMIPQ8IY22 773 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 CCDC170Q8IYT3 715 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 ZNF619Q8N2I2 560 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 POU5F2Q8N7G0 328 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 FAM13CQ8NE31 585 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 MNS1Q8NEH6 495 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 UHMK1Q8TAS1 419 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 JADE3Q92613 823 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 GAL3ST3Q96A11 431 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 KIF1BPQ96EK5 621 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 C1GALT1C1Q96EU7 318 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 MVB12AQ96EY5 273 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 BORCS6Q96GS4 357 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 MAELQ96JY0 434 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 MFSD14AQ96MC6 490 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 FAM210AQ96ND0 272 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 PIGSQ96S52 555 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 PI4K2AQ9BTU6 479 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 CNPPD1Q9BV87 410 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 UNKQ9C0B0 810 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 C2orf40Q9H1Z8 148 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 TMEM39AQ9NV64 488 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 UTP6Q9NYH9 597 aaKnown RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 TMOD4Q9NZQ9 345 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 SUN2Q9UH99 717 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 RASAL2Q9UJF2 1139 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 PADI4Q9UM07 663 aa6.62□□□□□ -1.35
RTF1-203ENST00000473214 EPN1Q9Y6I3 576 aaPredicted RBP6.62□□□□□ -1.35
RTF1-203ENST00000473214 DIP2AQ14689 1571 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ERVK-7P63135 1459 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 CDK12Q9NYV4 1490 aaPredicted RBP6.61□□□□□ -1.35
RTF1-203ENST00000473214 MBD5Q9P267 1494 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 USP19O94966 1318 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 PI4KAP2A4QPH2 592 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 CAPN8A6NHC0 703 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 GOLGA8AA7E2F4 631 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 GOLGA8BA8MQT2 603 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 DDX3XO00571 662 aaKnown RBP eCLIP6.61□□□□□ -1.35
RTF1-203ENST00000473214 NDC80O14777 642 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 TBX1O43435 398 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 AOC2O75106 756 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 COQ9O75208 318 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 RPS2P15880 293 aaKnown RBP6.61□□□□□ -1.35
RTF1-203ENST00000473214 BMP6P22004 513 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ITPKAP23677 461 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 RXRBP28702 533 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ITGA8P53708 1063 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ARF3P61204 181 aaPredicted RBP6.61□□□□□ -1.35
RTF1-203ENST00000473214 ARF1P84077 181 aaKnown RBP6.61□□□□□ -1.35
RTF1-203ENST00000473214 TRPC3Q13507 836 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 LRRC14Q15048 493 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 PPA1Q15181 289 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ANKRD1Q15327 319 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 VWA3BQ502W6 1294 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 MUM1L1Q5H9M0 696 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 RPUSD3Q6P087 351 aaKnown RBP6.61□□□□□ -1.35
RTF1-203ENST00000473214 LLGL2Q6P1M3 1020 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ABHD17CQ6PCB6 329 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 GALNT7Q86SF2 657 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 TBC1D21Q8IYX1 336 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 OR8H3Q8N146 312 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 GALNT15Q8N3T1 639 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 TCP11L2Q8N4U5 519 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 SIMC1Q8NDZ2 872 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 TDRD7Q8NHU6 1098 aaKnown RBP6.61□□□□□ -1.35
RTF1-203ENST00000473214 HTRA1Q92743 480 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 PHKBQ93100 1093 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ZKSCAN3Q9BRR0 538 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 KCTD10Q9H3F6 313 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 CABP5Q9NP86 173 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 ADD3Q9UEY8 706 aaKnown RBP6.61□□□□□ -1.35
RTF1-203ENST00000473214 SUSD2Q9UGT4 822 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 CEP83Q9Y592 693 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 PCDHA9Q9Y5H5 950 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 SHPRHQ149N8 1683 aa6.61□□□□□ -1.35
RTF1-203ENST00000473214 DHX29Q7Z478 1369 aaKnown RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 AFF2P51816 1311 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 METTL12A8MUP2 240 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 H0Y626 953 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 TNFRSF10CO14798 259 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 DLX3O60479 287 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 RTN3O95197 1032 aaPredicted RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 PRNPP04156 253 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 F13BP05160 661 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 EPHX1P07099 455 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 MSL3P1P0C860 447 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ALAS1P13196 640 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ACPPP15309 386 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ATP2A2P16615 1042 aaKnown RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 ENPP1P22413 925 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 POLD2P49005 469 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ADKP55263 362 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms