RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	IL20	Q9NYY1	176 aa		3.51	□□□□□ -1.85
TTC3-214	ENST00000472398	CLEC4A	Q9UMR7	237 aa		3.51	□□□□□ -1.85
TTC3-214	ENST00000472398	LRCH1	Q9Y2L9	728 aa		3.51	□□□□□ -1.85
TTC3-214	ENST00000472398	PCDHGB2	Q9Y5G2	931 aa		3.51	□□□□□ -1.85
TTC3-214	ENST00000472398	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	3.51	□□□□□ -1.85	4e-7	■■■■■ 31.7
TTC3-214	ENST00000472398	USP19	O94966	1318 aa		3.51	□□□□□ -1.85
TTC3-214	ENST00000472398		A0A1W2PPL8	197 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	PRR5-ARHGAP8	B1AHC4	643 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	MAPK13	O15264	365 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	MAGEB3	O15480	346 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	GREM1	O60565	184 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ERLIN1	O75477	346 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TRIM16	O95361	564 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	BAG4	O95429	457 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	SERPINC1	P01008	464 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ASGR1	P07306	291 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	POLR2M	P0CAP2	368 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	HSPA8	P11142	646 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CPE	P16870	476 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CTSS	P25774	331 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CHML	P26374	656 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	EVI2B	P34910	448 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	RABIF	P47224	123 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ARHGDIB	P52566	201 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	DNM1	Q05193	864 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	RUNX1T1	Q06455	604 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	COASY	Q13057	564 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	EFR3A	Q14156	821 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	DHCR24	Q15392	516 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TAF12	Q16514	161 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	RTN1	Q16799	776 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ALG11	Q2TAA5	492 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	C4orf17	Q53FE4	359 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	GNAS	Q5JWF2	1037 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	FAM209A	Q5JX71	171 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	LRSAM1	Q6UWE0	723 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	KRT74	Q7RTS7	529 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	MTDH	Q86UE4	582 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	KRT73	Q86Y46	540 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CD302	Q8IX05	232 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ZFPM1	Q8IX07	1006 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CCDC13	Q8IYE1	715 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	REXO1	Q8N1G1	1221 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	PRR18	Q8N4B5	295 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ZNF565	Q8N9K5	539 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ZSCAN1	Q8NBB4	408 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	OR56B2P	Q8NGI1	322 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CREB3L4	Q8TEY5	395 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	EXOC4	Q96A65	974 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	INTS12	Q96CB8	462 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	SUCLG2	Q96I99	432 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TRIM47	Q96LD4	638 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	HS6ST2	Q96MM7	605 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TCF25	Q9BQ70	676 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	RIOK1	Q9BRS2	568 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TMEM120A	Q9BXJ8	343 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TRPV6	Q9H1D0	765 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	THAP9	Q9H5L6	903 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CERS4	Q9HA82	394 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	C1orf112	Q9NSG2	853 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	FAM8A1	Q9UBU6	413 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CROT	Q9UKG9	612 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398		A0A0B4J269	797 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TRIM43B	A6NCK2	446 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	DDX39A	O00148	427 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ENC1	O14682	589 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	DIAPH2	O60879	1101 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	FBXO24	O75426	580 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	IDH1	O75874	414 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ZBED1	O96006	694 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	OPN1MW	P04001	364 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CHGB	P05060	677 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	OPN1MW2	P0DN77	364 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	OPN1MW3	P0DN78	364 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	HPGD	P15428	266 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	CES1	P23141	567 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	JAK1	P23458	1154 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TARS	P26639	723 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ANXA13	P27216	316 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ADSL	P30566	484 aa	Predicted RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	MCM5	P33992	734 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TUFM	P49411	452 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	SCNN1G	P51170	649 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ARPC4	P59998	168 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	SCARF1	Q14162	830 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	PLCL1	Q15111	1095 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	MAP3K11	Q16584	847 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	ZNF827	Q17R98	1081 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	HS1BP3	Q53T59	392 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TMEM240	Q5SV17	173 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	C1orf185	Q5T7R7	199 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	MAP3K21	Q5TCX8	1036 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	FBXW10	Q5XX13	1052 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	TMEM214	Q6NUQ4	689 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	C15orf52	Q6ZUT6	534 aa	Known RBP	3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	BNIPL	Q7Z465	357 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	LUZP1	Q86V48	1076 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	SPATA24	Q86W54	205 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	FAM114A1	Q8IWE2	563 aa		3.5	□□□□□ -1.85
TTC3-214	ENST00000472398	KCTD6	Q8NC69	237 aa		3.5	□□□□□ -1.85

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