RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 ENDOD1O94919 500 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 TNFRSF1AP19438 455 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 FPR1P21462 350 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 FLT3LGP49771 235 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 GPRIN1Q7Z2K8 1008 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 ZNF572Q7Z3I7 529 aaPredicted RBP9.06□□□□□ -0.96
SGCE-210ENST00000472326 TMPRSS6Q8IU80 811 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 RNF169Q8NCN4 708 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 LANCL2Q9NS86 450 aa9.06□□□□□ -0.96
SGCE-210ENST00000472326 AJAP1Q9UKB5 411 aaPredicted RBP9.06□□□□□ -0.96
SGCE-210ENST00000472326 XDHP47989 1333 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 ATRNL1Q5VV63 1379 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 FAM171A2A8MVW0 826 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 GOLGA6L6A8MZA4 724 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 ALOX15P16050 662 aaPredicted RBP9.05□□□□□ -0.96
SGCE-210ENST00000472326 KRT85P78386 507 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 VPS72Q15906 364 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 DCAF17Q5H9S7 520 aaPredicted RBP9.05□□□□□ -0.96
SGCE-210ENST00000472326 FAM47AQ5JRC9 791 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 AFMIDQ63HM1 303 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 RHOT1Q8IXI2 618 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 PLEKHG4BQ96PX9 1271 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 C7orf25Q9BPX7 421 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 CEP72Q9P209 647 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 SERPINB13Q9UIV8 391 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 LIMCH1Q9UPQ0 1083 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 PCDHA13Q9Y5I0 950 aa9.05□□□□□ -0.96
SGCE-210ENST00000472326 TBKBP1A7MCY6 615 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 CXorf49A8MYA2 514 aaPredicted RBP9.04□□□□□ -0.96
SGCE-210ENST00000472326 B5MCH6 92 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 FAM20BO75063 409 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 RAP2AP10114 183 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 GUCY1A2P33402 732 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 GJC2Q5T442 439 aaPredicted RBP9.04□□□□□ -0.96
SGCE-210ENST00000472326 DBX2Q6ZNG2 339 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 HTR3DQ70Z44 454 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 ZBTB46Q86UZ6 589 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 VPS11Q9H270 941 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 SAP30BPQ9UHR5 308 aaKnown RBP9.04□□□□□ -0.96
SGCE-210ENST00000472326 SPEF1Q9Y4P9 236 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 ACTL7AQ9Y615 435 aa9.04□□□□□ -0.96
SGCE-210ENST00000472326 PDGFRBP09619 1106 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 PCSK1P29120 753 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 ALDH1A3P47895 512 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 SLC16A1P53985 500 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 FOXE3Q13461 319 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 C3orf36Q3SXR2 165 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 ZGPATQ8N5A5 531 aaKnown RBP9.03□□□□□ -0.96
SGCE-210ENST00000472326 TFAP2CQ92754 450 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 ZNF747Q9BV97 191 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 CSRNP2Q9H175 543 aa9.03□□□□□ -0.96
SGCE-210ENST00000472326 AURKAIP1Q9NWT8 199 aaPredicted RBP9.03□□□□□ -0.96
SGCE-210ENST00000472326 CCDC154A6NI56 674 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 HTRA2O43464 458 aaPredicted RBP9.02□□□□□ -0.97
SGCE-210ENST00000472326 SNUPNO95149 360 aaKnown RBP9.02□□□□□ -0.97
SGCE-210ENST00000472326 ZRANB2O95218 330 aaKnown RBP eCLIP9.02□□□□□ -0.97
SGCE-210ENST00000472326 AMY1AP04745 511 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 EDNRBP24530 442 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 APOBEC3AP31941 199 aaPredicted RBP9.02□□□□□ -0.97
SGCE-210ENST00000472326 NEK2P51955 445 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 RAP2BP61225 183 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 SP140Q13342 867 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 IL10RAQ13651 578 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
SGCE-210ENST00000472326 BMT2Q1RMZ1 405 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 UAP1L1Q3KQV9 507 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.97
SGCE-210ENST00000472326 COA7Q96BR5 231 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 CHMP4CQ96CF2 233 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 ZNF503Q96F45 646 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 KRTAP4-9Q9BYQ8 210 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 TMEM140Q9NV12 185 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 TYW1Q9NV66 732 aaKnown RBP9.02□□□□□ -0.97
SGCE-210ENST00000472326 POGKQ9P215 609 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 SORCS3Q9UPU3 1222 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 RUVBL1Q9Y265 456 aaKnown RBP9.02□□□□□ -0.97
SGCE-210ENST00000472326 IPPQ9Y573 584 aa9.02□□□□□ -0.97
SGCE-210ENST00000472326 LEFTY2O00292 366 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 WASP42768 502 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 CLRN1P58418 232 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 SLC25A3Q00325 362 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 METTL24Q5JXM2 366 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 EFCAB12Q6NXP0 572 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 SYT12Q8IV01 421 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 MYOCQ99972 504 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 MRI1Q9BV20 369 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 ZNF341Q9BYN7 854 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 PARPBPQ9NWS1 579 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 LUC7L2Q9Y383 392 aaKnown RBP9.01□□□□□ -0.97
SGCE-210ENST00000472326 PNPLA7Q6ZV29 1317 aa9.01□□□□□ -0.97
SGCE-210ENST00000472326 MYBBP1AQ9BQG0 1328 aaKnown RBP9.01□□□□□ -0.97
SGCE-210ENST00000472326 GRXCR1A8MXD5 290 aa9□□□□□ -0.97
SGCE-210ENST00000472326 GPR32O75388 356 aa9□□□□□ -0.97
SGCE-210ENST00000472326 ALDH1L1O75891 902 aa9□□□□□ -0.97
SGCE-210ENST00000472326 IL2RBP14784 551 aa9□□□□□ -0.97
SGCE-210ENST00000472326 RECQLP46063 649 aaPredicted RBP9□□□□□ -0.97
SGCE-210ENST00000472326 PTH1RQ03431 593 aa9□□□□□ -0.97
SGCE-210ENST00000472326 MIGA2Q7L4E1 593 aa9□□□□□ -0.97
SGCE-210ENST00000472326 CPT1CQ8TCG5 803 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms