RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
CLRN1-205ENST00000472224 A0A087X0B3 334 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 LOC730098B7Z3J9 87 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 H0Y858 1186 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 K7ENM7 598 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ACKR2O00590 384 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLRN1-205ENST00000472224 EDN1P05305 212 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 RB1P06400 928 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 MLH1P40692 756 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 KRT85P78386 507 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 FAM187BQ17R55 369 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 NOMO2Q5JPE7 1267 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ATF7IP2Q5U623 682 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ATL3Q6DD88 541 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 AGMOQ6ZNB7 445 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 DYMQ7RTS9 669 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ERMP1Q7Z2K6 904 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 MYCT1Q8N699 235 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 KLHL23Q8NBE8 558 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
CLRN1-205ENST00000472224 DHX58Q96C10 678 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ASIC4Q96FT7 647 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 CWH43Q9H720 699 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 C17orf75Q9HAS0 396 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 TLR9Q9NR96 1032 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ARHGAP28Q9P2N2 729 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 PARP2Q9UGN5 583 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ODF2LQ9ULJ1 636 aa13.05□□□□□ -0.32
CLRN1-205ENST00000472224 ZFHX4Q86UP3 3567 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 PRR23AA6NEV1 266 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 C5orf67F2Z3F1 127 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 GRM6O15303 877 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 NCK2O43639 380 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 ZNF623O75123 536 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 OFD1O75665 1012 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 ITGB1P05556 798 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 HARSP12081 509 aaKnown RBP13.04□□□□□ -0.32
CLRN1-205ENST00000472224 AKAP5P24588 427 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 AVPR2P30518 371 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 DDIT3P35638 169 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 SMTNP53814 917 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 STRN3Q13033 797 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 SV2BQ7L1I2 683 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 BICD1Q96G01 975 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 SPATA32Q96LK8 384 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 ZNF558Q96NG5 402 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 PLVAPQ9BX97 442 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 MRPL4Q9BYD3 311 aaKnown RBP13.04□□□□□ -0.32
CLRN1-205ENST00000472224 PARVGQ9HBI0 331 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 KLK14Q9P0G3 267 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 LARSQ9P2J5 1176 aaKnown RBP13.04□□□□□ -0.32
CLRN1-205ENST00000472224 CD207Q9UJ71 328 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 ATP6V1DQ9Y5K8 247 aa13.04□□□□□ -0.32
CLRN1-205ENST00000472224 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 MYMKA6NI61 221 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 POMCP01189 267 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 IDEP14735 1019 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 MATR3P43243 847 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 BCAR1P56945 870 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 GIT2Q14161 759 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 CBX2Q14781 532 aaPredicted RBP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 DCAF4L1Q3SXM0 396 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 NAALADL2Q58DX5 795 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 KCNT2Q6UVM3 1135 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 TAS1R3Q7RTX0 852 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 APBB1IPQ7Z5R6 666 aaPredicted RBP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 MRPL10Q7Z7H8 261 aaKnown RBP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 DDX12PQ92771 950 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 P2RX5Q93086 422 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 RPS6KC1Q96S38 1066 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 GAD1Q99259 594 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 UBN1Q9NPG3 1134 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 TBC1D13Q9NVG8 400 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 PCDHA7Q9UN72 937 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 GDAQ9Y2T3 454 aa13.03□□□□□ -0.32
CLRN1-205ENST00000472224 RBM19Q9Y4C8 960 aaKnown RBP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 KMT2BQ9UMN6 2715 aaPredicted RBP13.03□□□□□ -0.32
CLRN1-205ENST00000472224 NT5C1B-RDH14C9J2C7 533 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 H0YCG3 227 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 FGF18O76093 207 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 MAPTP10636 758 aaKnown RBP13.02□□□□□ -0.33
CLRN1-205ENST00000472224 CA8P35219 290 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 PPM1AP35813 382 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms