RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SPACA6W5XKT8 324 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 FLT1P17948 1338 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 POTECB2RU33 542 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 MSCO60682 206 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 SERPINB6P35237 376 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 RGS7P49802 495 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 BCAR1P56945 870 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 GRM4Q14833 912 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 RBM23Q86U06 439 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 ZNF589Q86UQ0 364 aaPredicted RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 PPHLN1Q8NEY8 458 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 CDCA5Q96FF9 252 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 CINPQ9BW66 212 aaPredicted RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 OSGEPL1Q9H4B0 414 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 ECT2Q9H8V3 914 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 CBX8Q9HC52 389 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 TRPM5Q9NZQ8 1165 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 TUBE1Q9UJT0 475 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 C1orf167Q5SNV9 1468 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 POTEFA5A3E0 1075 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 CFAP99D6REC4 459 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 ZNF263O14978 683 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 PRMT3O60678 531 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 CTSEP14091 401 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 POTEGQ6S5H5 508 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 CHMP1BQ7LBR1 199 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 ATP6V0D2Q8N8Y2 350 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 NSUN7Q8NE18 718 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 USP42Q9H9J4 1324 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 BAG2O95816 211 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 PRKCEQ02156 737 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 LMBRD2Q68DH5 695 aaPredicted RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 KIAA1324Q6UXG2 1013 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 CACUL1Q86Y37 369 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 POTEDQ86YR6 584 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 SMAP1Q8IYB5 467 aaPredicted RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 SIX5Q8N196 739 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 AFAP1L1Q8TED9 768 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 RSRC1Q96IZ7 334 aaKnown RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 DEFB118Q96PH6 123 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 OXCT2Q9BYC2 517 aaPredicted RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 TM6SF1Q9BZW5 370 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 ABCG4Q9H172 646 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 GTSE1Q9NYZ3 720 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 FBXL5Q9UKA1 691 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 RIMBP3CA6NJZ7 1639 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 RIMBP3BA6NNM3 1639 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 RIMBP3Q9UFD9 1639 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.09□□□□□ -0.95
CD47-204ENST00000471694 E9PMD0 336 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 RCN2Q14257 317 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 SPATA1Q5VX52 437 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 KLHL11Q9NVR0 708 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 EPS15L1Q9UBC2 864 aa9.09□□□□□ -0.95
CD47-204ENST00000471694 CNTNAP4Q9C0A0 1308 aa9.09□□□□□ -0.96
CD47-204ENST00000471694 NKRFO15226 690 aaKnown RBP eCLIP9.08□□□□□ -0.96
CD47-204ENST00000471694 NDUFB10O96000 172 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 MT-ND3P03897 115 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 ZNF286BP0CG31 522 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 NBPF12Q5TAG4 269 aaPredicted RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 FIBCD1Q8N539 461 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 USP28Q96RU2 1077 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 STX18Q9P2W9 335 aaKnown RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 SEL1LQ9UBV2 794 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 CMA1P23946 247 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 MAPRE1Q15691 268 aaKnown RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 SMAD1Q15797 465 aaKnown RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 TRIM42Q8IWZ5 723 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 TAGAPQ8N103 731 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 GGT7Q9UJ14 662 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 SAR1BQ9Y6B6 198 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 B3GAT3O94766 335 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 IL18RAPO95256 599 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 MZF1P28698 734 aaPredicted RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 RPL10AP62906 217 aaKnown RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 TFDP2Q14188 446 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 PCSK7Q16549 785 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 AARS2Q5JTZ9 985 aaKnown RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 HES6Q96HZ4 224 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 STRBPQ96SI9 672 aaKnown RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 CYP26B1Q9NR63 512 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 NEDD4P46934 1319 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 P4HA2O15460 535 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 CCL23P55773 120 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 ART3Q13508 389 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 CCDC85BQ15834 202 aaPredicted RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 WDR72Q3MJ13 1102 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 TMTC3Q6ZXV5 915 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 PPWD1Q96BP3 646 aaKnown RBP9.08□□□□□ -0.96
CD47-204ENST00000471694 AGBL1Q96MI9 1066 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 CARD6Q9BX69 1037 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 PRDM10Q9NQV6 1147 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 KANSL3Q9P2N6 904 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 IMPACTQ9P2X3 320 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 LCMT1Q9UIC8 334 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 ANAPC7Q9UJX3 599 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 MROH7Q68CQ1 1323 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms