RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 USP8P40818 1118 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 NAMPTP43490 491 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 CNTN2Q02246 1040 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 PPP2R5EQ16537 467 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 PTPROQ16827 1216 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 GOLGA6L1Q8N7Z2 621 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 POP1Q99575 1024 aaKnown RBP20.04■□□□□ 0.8
COL20A1-205ENST00000471582 ZHX1Q9UKY1 873 aaPredicted RBP20.04■□□□□ 0.8
COL20A1-205ENST00000471582 AGTPBP1Q9UPW5 1226 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 ZSCAN5CA6NGD5 496 aaPredicted RBP20.04■□□□□ 0.8
COL20A1-205ENST00000471582 CYP26A1O43174 497 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 OPA1O60313 960 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 POTEJP0CG39 1038 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 STRN3Q13033 797 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 C15orf39Q6ZRI6 1047 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 MORC4Q8TE76 937 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 FAM213AQ9BRX8 229 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 TOPORSQ9NS56 1045 aaPredicted RBP20.04■□□□□ 0.8
COL20A1-205ENST00000471582 CTTNBP2NLQ9P2B4 639 aa20.04■□□□□ 0.8
COL20A1-205ENST00000471582 ESYT3A0FGR9 886 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 CYP11B1P15538 503 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 RFC5P40937 340 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 LIG4P49917 911 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 PDE6CP51160 858 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 FMO1Q01740 532 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 CDR2Q01850 454 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 PSMD6Q15008 389 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 MAATS1Q7Z4T9 603 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 TSEN2Q8NCE0 465 aaKnown RBP20.03■□□□□ 0.8
COL20A1-205ENST00000471582 AFAP1L1Q8TED9 768 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
COL20A1-205ENST00000471582 SLC7A3Q8WY07 619 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 IFT81Q8WYA0 676 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 RPS6KC1Q96S38 1066 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 PCDHB18PQ96TA0 734 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 AP1M1Q9BXS5 423 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 SPATC1LQ9H0A9 340 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 BTBD7Q9P203 1132 aa20.03■□□□□ 0.8
COL20A1-205ENST00000471582 UNCXA6NJT0 531 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 GOLGA8KD6RF30 607 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 HSF2BPO75031 334 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 UBA1P22314 1058 aaKnown RBP20.02■□□□□ 0.8
COL20A1-205ENST00000471582 ARL2P36404 184 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 LMAN1P49257 510 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 LDLRAD1Q5T700 205 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.8
COL20A1-205ENST00000471582 FASTKD5Q7L8L6 764 aaKnown RBP20.02■□□□□ 0.8
COL20A1-205ENST00000471582 SLC47A2Q86VL8 602 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 CCDC26Q8TAB7 109 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 PSPC1Q8WXF1 523 aaKnown RBP20.02■□□□□ 0.8
COL20A1-205ENST00000471582 OPTNQ96CV9 577 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 CEP89Q96ST8 783 aa20.02■□□□□ 0.8
COL20A1-205ENST00000471582 DLATP10515 647 aaKnown RBP20.02■□□□□ 0.79
COL20A1-205ENST00000471582 TGFB3P10600 412 aa20.02■□□□□ 0.79
COL20A1-205ENST00000471582 ERVK-9P63128 1117 aa20.02■□□□□ 0.79
COL20A1-205ENST00000471582 DCAF12L1Q5VU92 463 aa20.02■□□□□ 0.79
COL20A1-205ENST00000471582 SLFN12LQ6IEE8 588 aa20.02■□□□□ 0.79
COL20A1-205ENST00000471582 SEPT14Q6ZU15 432 aa20.02■□□□□ 0.79
COL20A1-205ENST00000471582 RNPC3Q96LT9 517 aaKnown RBP20.02■□□□□ 0.79
COL20A1-205ENST00000471582 ASCC2Q9H1I8 757 aaPredicted RBP20.02■□□□□ 0.79
COL20A1-205ENST00000471582 PPME1Q9Y570 386 aa20.02■□□□□ 0.79
COL20A1-205ENST00000471582 ALG6Q9Y672 507 aa20.02■□□□□ 0.79
COL20A1-205ENST00000471582 ERICH4A6NGS2 130 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 FARP2O94887 1054 aaPredicted RBP20.01■□□□□ 0.79
COL20A1-205ENST00000471582 FGGP02679 453 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 CYP1A2P05177 515 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 GLRA2P23416 452 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 FSTL1Q12841 308 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 PPFIA1Q13136 1202 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 NEDD9Q14511 834 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 NCAPG2Q86XI2 1143 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 UBL4BQ8N7F7 174 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 RIN2Q8WYP3 895 aaPredicted RBP20.01■□□□□ 0.79
COL20A1-205ENST00000471582 SEC14L1Q92503 715 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 RUFY1Q96T51 708 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 DDX47Q9H0S4 455 aaKnown RBP20.01■□□□□ 0.79
COL20A1-205ENST00000471582 GTF3C4Q9UKN8 822 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 LRRC37A2A6NM11 1700 aa20.01■□□□□ 0.79
COL20A1-205ENST00000471582 SORBS3O60504 671 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 MMEP08473 750 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 FAM153BP0C7A2 387 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 OSBPP22059 807 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 COPB2P35606 906 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 FAM153CQ494X1 144 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 TAF3Q5VWG9 929 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20■□□□□ 0.79
COL20A1-205ENST00000471582 DEPTORQ8TB45 409 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 ASAP3Q8TDY4 903 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 DDX1Q92499 740 aaKnown RBP20■□□□□ 0.79
COL20A1-205ENST00000471582 TMEM143Q96AN5 459 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 RRAGCQ9HB90 399 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 C1orf112Q9NSG2 853 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 UVRAGQ9P2Y5 699 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 FAM153AQ9UHL3 310 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 AGO2Q9UKV8 859 aaKnown RBP20■□□□□ 0.79
COL20A1-205ENST00000471582 GOLGA6L10A0A0M3HER8 536 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 GSTTP1A0A1W2PQM5 241 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
COL20A1-205ENST00000471582 SLC25A27O95847 323 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms