RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 MIOSQ9NXC5 875 aa19.4■□□□□ 0.7
VPS72-204ENST00000471423 KANSL3Q9P2N6 904 aa19.4■□□□□ 0.7
VPS72-204ENST00000471423 PCDHB13Q9Y5F0 798 aa19.4■□□□□ 0.7
VPS72-204ENST00000471423 EYSQ5T1H1 3165 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 PVALEFA0A1B0GWK0 134 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 TISP43B9A030 160 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 ANKRD63C9JTQ0 380 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 GTPBP6O43824 516 aaPredicted RBP19.39■□□□□ 0.69
VPS72-204ENST00000471423 GADD45BO75293 160 aaPredicted RBP19.39■□□□□ 0.69
VPS72-204ENST00000471423 ITGB1P05556 798 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 BCAR1P56945 870 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 FAM160A1Q05DH4 1040 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 EHHADHQ08426 723 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 ALCAMQ13740 583 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 GSTCDQ8NEC7 633 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 ACCSQ96QU6 501 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 CCDC94Q9BW85 323 aaPredicted RBP19.39■□□□□ 0.69
VPS72-204ENST00000471423 NRDE2Q9H7Z3 1164 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 ALG13Q9NP73 1137 aaKnown RBP19.39■□□□□ 0.69
VPS72-204ENST00000471423 DNAJB4Q9UDY4 337 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 STXBP5LQ9Y2K9 1186 aa19.39■□□□□ 0.69
VPS72-204ENST00000471423 GRM6O15303 877 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 KLRC4O43908 158 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 DDHD2O94830 711 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 PRPF6O94906 941 aaKnown RBP19.38■□□□□ 0.69
VPS72-204ENST00000471423 MYL1P05976 194 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 SNW1Q13573 536 aaKnown RBP19.38■□□□□ 0.69
VPS72-204ENST00000471423 SEZ6Q53EL9 994 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 ENGASEQ8NFI3 743 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 FAM193BQ96PV7 902 aaPredicted RBP19.38■□□□□ 0.69
VPS72-204ENST00000471423 CXCL16Q9H2A7 254 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 PLAGL2Q9UPG8 496 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 EXOC7Q9UPT5 735 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 MTCH2Q9Y6C9 303 aa19.38■□□□□ 0.69
VPS72-204ENST00000471423 TDRD15B5MCY1 1934 aaKnown RBP19.37■□□□□ 0.69
VPS72-204ENST00000471423 PLXNA4Q9HCM2 1894 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 NT5C1B-RDH14C9J2C7 533 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 PTGESO14684 152 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 FGF18O76093 207 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 CSPG5O95196 566 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 PPM1AP35813 382 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 ALDH7A1P49419 539 aaKnown RBP19.37■□□□□ 0.69
VPS72-204ENST00000471423 YARSP54577 528 aaKnown RBP19.37■□□□□ 0.69
VPS72-204ENST00000471423 GRIK3Q13003 919 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 STXBP4Q6ZWJ1 553 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 MICALL1Q8N3F8 863 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 MSTO1Q9BUK6 570 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 TOPORSQ9NS56 1045 aaPredicted RBP19.37■□□□□ 0.69
VPS72-204ENST00000471423 EXOC1Q9NV70 894 aa19.37■□□□□ 0.69
VPS72-204ENST00000471423 A0A0B4J269 797 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 NR1I2O75469 434 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 RPN1P04843 607 aaKnown RBP19.36■□□□□ 0.69
VPS72-204ENST00000471423 GALTP07902 379 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 SLC11A1P49279 550 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 DSC1Q08554 894 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 DPYDQ12882 1025 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 GLRA4Q5JXX5 417 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 EPM2AIP1Q7L775 607 aaPredicted RBP19.36■□□□□ 0.69
VPS72-204ENST00000471423 SYCP3Q8IZU3 236 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 SLC39A11Q8N1S5 342 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 SPPL3Q8TCT6 385 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 MRPL38Q96DV4 380 aaKnown RBP19.36■□□□□ 0.69
VPS72-204ENST00000471423 CCDC34Q96HJ3 373 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 SNX27Q96L92 541 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 ACAP3Q96P50 834 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 SLC39A2Q9NP94 309 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 SPG21Q9NZD8 308 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 COL6A3P12111 3177 aa19.36■□□□□ 0.69
VPS72-204ENST00000471423 OGTO15294 1046 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 EIF3DO15371 548 aaKnown RBP eCLIP19.35■□□□□ 0.69
VPS72-204ENST00000471423 MEFVO15553 781 aaPredicted RBP19.35■□□□□ 0.69
VPS72-204ENST00000471423 FAM189A1O60320 539 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 POU3F3P20264 500 aaPredicted RBP19.35■□□□□ 0.69
VPS72-204ENST00000471423 DNAJB1P25685 340 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 TNFSF9P41273 254 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 POSTNQ15063 836 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 PTPROQ16827 1216 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 ZBTB41Q5SVQ8 909 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 KANK3Q6NY19 840 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 TMEM173Q86WV6 379 aaPredicted RBP19.35■□□□□ 0.69
VPS72-204ENST00000471423 COLGALT2Q8IYK4 626 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 MAFAQ8NHW3 353 aaPredicted RBP19.35■□□□□ 0.69
VPS72-204ENST00000471423 BCL7CQ8WUZ0 217 aaPredicted RBP19.35■□□□□ 0.69
VPS72-204ENST00000471423 POF1BQ8WVV4 589 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 TMEM175Q9BSA9 504 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 LMAN2LQ9H0V9 348 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 TMEM206Q9H813 350 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 STYXL1Q9Y6J8 313 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 ATG2AQ2TAZ0 1938 aa19.35■□□□□ 0.69
VPS72-204ENST00000471423 PRRC2BQ5JSZ5 2229 aaKnown RBP19.35■□□□□ 0.69
VPS72-204ENST00000471423 THP07101 528 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 CLTAP09496 248 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 CXCL8P10145 99 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 ADSSP30520 456 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 OR1G1P47890 313 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 SLFN12LQ6IEE8 588 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 POMGNT1Q8WZA1 660 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 LMCD1Q9NZU5 365 aa19.34■□□□□ 0.69
VPS72-204ENST00000471423 CACNG4Q9UBN1 327 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms