RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 LY6G5CQ5SRR4 150 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 MBNL2Q5VZF2 373 aaKnown RBP7.59□□□□□ -1.19
CCDC39-202ENST00000471307 GDF7Q7Z4P5 450 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 NECAB2Q7Z6G3 386 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 MRGPRGQ86SM5 289 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 PLXDC1Q8IUK5 500 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 OR10H5Q8NGA6 315 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 TFAP2CQ92754 450 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 MYEOVQ96EZ4 313 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 CEP95Q96GE4 821 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 CEP89Q96ST8 783 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 MENTQ9BUN1 341 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 SPC25Q9HBM1 224 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 CCM2LQ9NUG4 571 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-202ENST00000471307 DNAJC28Q9NX36 388 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 CHST2Q9Y4C5 530 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 HS3ST4Q9Y661 456 aa7.59□□□□□ -1.19
CCDC39-202ENST00000471307 AHRRA9YTQ3 701 aa7.58□□□□□ -1.2
CCDC39-202ENST00000471307 RNASET2O00584 256 aaKnown RBP7.58□□□□□ -1.2
CCDC39-202ENST00000471307 ABHD16AO95870 558 aa7.58□□□□□ -1.2
CCDC39-202ENST00000471307 SNRPA1P09661 255 aaKnown RBP7.58□□□□□ -1.2
CCDC39-202ENST00000471307 LAG3P18627 525 aa7.58□□□□□ -1.2
CCDC39-202ENST00000471307 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
CCDC39-202ENST00000471307 MFSD14BQ5SR56 506 aa7.58□□□□□ -1.2
CCDC39-202ENST00000471307 Q6ZVL8 140 aa7.58□□□□□ -1.2
CCDC39-202ENST00000471307 ZNF627Q7L945 461 aa7.58□□□□□ -1.2
CCDC39-202ENST00000471307 TRMT2AQ8IZ69 625 aaKnown RBP7.58□□□□□ -1.2
CCDC39-202ENST00000471307 PUS7LQ9H0K6 701 aaKnown RBP7.58□□□□□ -1.2
CCDC39-202ENST00000471307 TRPM5Q9NZQ8 1165 aa7.58□□□□□ -1.2
CCDC39-202ENST00000471307 A0A087X1B8 175 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 ADCY6O43306 1168 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 ENDOD1O94919 500 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 IL2RBP14784 551 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
CCDC39-202ENST00000471307 ADSLP30566 484 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-202ENST00000471307 PTPN7P35236 360 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 MCAMP43121 646 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 CLRN1P58418 232 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 NHLH2Q02577 135 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 PTPAQ15257 358 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 CSRP2Q16527 193 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 ANKS6Q68DC2 871 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 PROKR1Q8TCW9 393 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 HOXB13Q92826 284 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-202ENST00000471307 ADI1Q9BV57 179 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 IKZF4Q9H2S9 585 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 POGKQ9P215 609 aa7.57□□□□□ -1.2
CCDC39-202ENST00000471307 CECR2Q9BXF3 1484 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 TRIM75PA6NK02 468 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 LEFTY2O00292 366 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 SPATA31D3P0C874 917 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 ALOX15P16050 662 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-202ENST00000471307 ZSCAN20P17040 1043 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-202ENST00000471307 SREBF1P36956 1147 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 CCT2P78371 535 aaKnown RBP7.56□□□□□ -1.2
CCDC39-202ENST00000471307 MGAT2Q10469 447 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 KLF1Q13351 362 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-202ENST00000471307 TIGD2Q4W5G0 525 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 RRP12Q5JTH9 1297 aaKnown RBP7.56□□□□□ -1.2
CCDC39-202ENST00000471307 KCNV1Q6PIU1 500 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 Q6ZPA2 131 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 SPATA31D4Q6ZUB0 917 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 SYT12Q8IV01 421 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 COG1Q8WTW3 980 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 UHRF1Q96T88 793 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-202ENST00000471307 ZNF277Q9NRM2 450 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-202ENST00000471307 LANCL2Q9NS86 450 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 MOCS1Q9NZB8 636 aa7.56□□□□□ -1.2
CCDC39-202ENST00000471307 FAM171A2A8MVW0 826 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 CXorf49A8MYA2 514 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-202ENST00000471307 FOXN1O15353 648 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 RAMP2O60895 175 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 GUCY1A2P33402 732 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 BMPR1AP36894 532 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 PER3P56645 1201 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 PPP3CAQ08209 521 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 RNF187Q5TA31 235 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-202ENST00000471307 AMOTL1Q8IY63 956 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 DRC7Q8IY82 874 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 RPUSD2Q8IZ73 545 aaKnown RBP7.55□□□□□ -1.2
CCDC39-202ENST00000471307 CASKIN2Q8WXE0 1202 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 CYFIP2Q96F07 1278 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 ZNF768Q9H5H4 540 aaKnown RBP7.55□□□□□ -1.2
CCDC39-202ENST00000471307 FAM30AQ9NZY2 134 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 ATRNL1Q5VV63 1379 aa7.55□□□□□ -1.2
CCDC39-202ENST00000471307 BAZ1AQ9NRL2 1556 aaPredicted RBP7.54□□□□□ -1.2
CCDC39-202ENST00000471307 TMEM200CA6NKL6 621 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 TEX33O43247 280 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 IGSF3O75054 1194 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 KRT4P19013 534 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 AGXTP21549 392 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 TAP1Q03518 808 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 ATXN7L2Q5T6C5 722 aaPredicted RBP7.54□□□□□ -1.2
CCDC39-202ENST00000471307 FAM102AQ5T9C2 384 aaPredicted RBP7.54□□□□□ -1.2
CCDC39-202ENST00000471307 ARMC6Q6NXE6 501 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 PCSK4Q6UW60 755 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 PQLC1Q8N2U9 271 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 REPS2Q8NFH8 660 aa7.54□□□□□ -1.2
CCDC39-202ENST00000471307 FAM126AQ9BYI3 521 aaPredicted RBP7.54□□□□□ -1.2
CCDC39-202ENST00000471307 AKIP1Q9NQ31 210 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms