RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ALCAMQ13740 583 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 FAM26FQ5R3K3 315 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 KCNT2Q6UVM3 1135 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 ZNF280BQ86YH2 543 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 KLHL23Q8NBE8 558 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 GSTCDQ8NEC7 633 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 RPS6KC1Q96S38 1066 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 GBP3Q9H0R5 595 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 CXCL16Q9H2A7 254 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 IKZF4Q9H2S9 585 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 PCDHB12Q9Y5F1 795 aa21.62■■□□□ 1.05
HDAC7-220ENST00000471235 PVALEFA0A1B0GWK0 134 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 TISP43B9A030 160 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 GRM6O15303 877 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 CLDN3O15551 220 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 ZC3H11AO75152 810 aaKnown RBP eCLIP21.61■■□□□ 1.05
HDAC7-220ENST00000471235 GADD45BO75293 160 aaPredicted RBP21.61■■□□□ 1.05
HDAC7-220ENST00000471235 DDHD2O94830 711 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 ITGB1P05556 798 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 IGFBP4P22692 258 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 MATR3P43243 847 aaKnown RBP eCLIP21.61■■□□□ 1.05
HDAC7-220ENST00000471235 OSTNP61366 133 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 KCNA1Q09470 495 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 ENGASEQ8NFI3 743 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 ACCSQ96QU6 501 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 CCDC94Q9BW85 323 aaPredicted RBP21.61■■□□□ 1.05
HDAC7-220ENST00000471235 KANSL3Q9P2N6 904 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 DNAJB4Q9UDY4 337 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 PLAGL2Q9UPG8 496 aa21.61■■□□□ 1.05
HDAC7-220ENST00000471235 ANKRD63C9JTQ0 380 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 PTGESO14684 152 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 PRPF6O94906 941 aaKnown RBP21.6■■□□□ 1.05
HDAC7-220ENST00000471235 MYL1P05976 194 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 POU3F3P20264 500 aaPredicted RBP21.6■■□□□ 1.05
HDAC7-220ENST00000471235 BCAR1P56945 870 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 FAM160A1Q05DH4 1040 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 GRIK3Q13003 919 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 SNW1Q13573 536 aaKnown RBP21.6■■□□□ 1.05
HDAC7-220ENST00000471235 THNSL1Q8IYQ7 743 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 SLC39A11Q8N1S5 342 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 PCDHB13Q9Y5F0 798 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 MTCH2Q9Y6C9 303 aa21.6■■□□□ 1.05
HDAC7-220ENST00000471235 VWA8A3KMH1 1905 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 FAM189A1O60320 539 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 FGF18O76093 207 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 PPM1AP35813 382 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 SLC11A1P49279 550 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 DSC1Q08554 894 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 SEZ6Q53EL9 994 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 STXBP4Q6ZWJ1 553 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 EPM2AIP1Q7L775 607 aaPredicted RBP21.59■■□□□ 1.05
HDAC7-220ENST00000471235 SNX27Q96L92 541 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 FAM193BQ96PV7 902 aaPredicted RBP21.59■■□□□ 1.05
HDAC7-220ENST00000471235 ALG13Q9NP73 1137 aaKnown RBP21.59■■□□□ 1.05
HDAC7-220ENST00000471235 EXOC7Q9UPT5 735 aa21.59■■□□□ 1.05
HDAC7-220ENST00000471235 UBE4BO95155 1302 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 REV3LO60673 3130 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 A0A0B4J269 797 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 NT5C1B-RDH14C9J2C7 533 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 EIF3DO15371 548 aaKnown RBP eCLIP21.58■■□□□ 1.05
HDAC7-220ENST00000471235 MEFVO15553 781 aaPredicted RBP21.58■■□□□ 1.05
HDAC7-220ENST00000471235 DNAJB1P25685 340 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 DPYDQ12882 1025 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 KMT5BQ4FZB7 885 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 ZBTB41Q5SVQ8 909 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 TMEM173Q86WV6 379 aaPredicted RBP21.58■■□□□ 1.05
HDAC7-220ENST00000471235 COLGALT2Q8IYK4 626 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 SPPL3Q8TCT6 385 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 TMEM175Q9BSA9 504 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 MSTO1Q9BUK6 570 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 LMAN2LQ9H0V9 348 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 EXOC1Q9NV70 894 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 SPG21Q9NZD8 308 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 LMCD1Q9NZU5 365 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 STYXL1Q9Y6J8 313 aa21.58■■□□□ 1.05
HDAC7-220ENST00000471235 OGTO15294 1046 aa21.57■■□□□ 1.04
HDAC7-220ENST00000471235 SLC34A2O95436 690 aa21.57■■□□□ 1.04
HDAC7-220ENST00000471235 GALTP07902 379 aa21.57■■□□□ 1.04
HDAC7-220ENST00000471235 YARSP54577 528 aaKnown RBP21.57■■□□□ 1.04
HDAC7-220ENST00000471235 GLRA4Q5JXX5 417 aa21.57■■□□□ 1.04
HDAC7-220ENST00000471235 MAFAQ8NHW3 353 aaPredicted RBP21.57■■□□□ 1.04
HDAC7-220ENST00000471235 BCL7CQ8WUZ0 217 aaPredicted RBP21.57■■□□□ 1.04
HDAC7-220ENST00000471235 MRPL38Q96DV4 380 aaKnown RBP21.57■■□□□ 1.04
HDAC7-220ENST00000471235 ACAP3Q96P50 834 aa21.57■■□□□ 1.04
HDAC7-220ENST00000471235 TOPORSQ9NS56 1045 aaPredicted RBP21.57■■□□□ 1.04
HDAC7-220ENST00000471235 NR1I2O75469 434 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 CSPG5O95196 566 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 RPN1P04843 607 aaKnown RBP21.56■■□□□ 1.04
HDAC7-220ENST00000471235 CXCL8P10145 99 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 HOXD13P35453 343 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 TNFSF9P41273 254 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 ALDH7A1P49419 539 aaKnown RBP21.56■■□□□ 1.04
HDAC7-220ENST00000471235 PLCB3Q01970 1234 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 CAMK1Q14012 370 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 POSTNQ15063 836 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 NAB2Q15742 525 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 PTPROQ16827 1216 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 XKR4Q5GH76 650 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 KANK3Q6NY19 840 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 SYCP3Q8IZU3 236 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms