RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 MAGEC2Q9UBF1 373 aaPredicted RBP12.65□□□□□ -0.38
FN1-217ENST00000471193 ARMCX3Q9UH62 379 aaPredicted RBP12.65□□□□□ -0.38
FN1-217ENST00000471193 LIMA1Q9UHB6 759 aaKnown RBP12.65□□□□□ -0.38
FN1-217ENST00000471193 SCN5AQ14524 2016 aa12.65□□□□□ -0.38
FN1-217ENST00000471193 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 CLTAP09496 248 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 STAG3L1P0CL83 205 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 POU5F1Q01860 360 aaKnown RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 ENPEPQ07075 957 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 BFSP1Q12934 665 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 KRT31Q15323 416 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 CNKSR3Q6P9H4 555 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 INTS8Q75QN2 995 aaKnown RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 APTXQ7Z2E3 356 aaKnown RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 TMEM192Q8IY95 271 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 TMEM199Q8N511 208 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 SMG8Q8ND04 991 aaKnown RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 PLEKHO2Q8TD55 490 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 MFSD14AQ96MC6 490 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 ADAM2Q99965 735 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 RGS18Q9NS28 235 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 RBAKQ9NYW8 714 aaPredicted RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 PRKAG2Q9UGJ0 569 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 IPPQ9Y573 584 aa12.64□□□□□ -0.39
FN1-217ENST00000471193 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
FN1-217ENST00000471193 A0A0U1RQF3 1178 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 MEFVO15553 781 aaPredicted RBP12.63□□□□□ -0.39
FN1-217ENST00000471193 EVI5O60447 810 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 PFKMP08237 780 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 CXCL8P10145 99 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 KRT13P13646 458 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 CSF2RAP15509 400 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 ATF7P17544 494 aaPredicted RBP12.63□□□□□ -0.39
FN1-217ENST00000471193 CDK11BP21127 795 aaKnown RBP12.63□□□□□ -0.39
FN1-217ENST00000471193 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
FN1-217ENST00000471193 WNT7BP56706 349 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 OSTNP61366 133 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 PSMD6Q15008 389 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 MAN2A1Q16706 1144 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 SARM1Q6SZW1 724 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 DEFB128Q7Z7B8 93 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 SLC35C1Q96A29 364 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 SNX27Q96L92 541 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 CCDC94Q9BW85 323 aaPredicted RBP12.63□□□□□ -0.39
FN1-217ENST00000471193 GRPEL1Q9HAV7 217 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 SNTG2Q9NY99 539 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 TAB2Q9NYJ8 693 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 HES2Q9Y543 173 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 PCDHB2Q9Y5E7 798 aa12.63□□□□□ -0.39
FN1-217ENST00000471193 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 C9IYK1 514 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 ZNF623O75123 536 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 RECQL4O94761 1208 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 SKIP12755 728 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 VAMP7P51809 220 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 COPB1P53618 953 aaKnown RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 FANCCQ00597 558 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 MIIPQ5JXC2 388 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 MRPL10Q7Z7H8 261 aaKnown RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 RTN4RL1Q86UN2 441 aaPredicted RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 ECHDC2Q86YB7 292 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 HACE1Q8IYU2 909 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 ACAP3Q96P50 834 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 TUBGCP2Q9BSJ2 902 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 RPF1Q9H9Y2 349 aaKnown RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
FN1-217ENST00000471193 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
FN1-217ENST00000471193 A0A1B0GTH6 734 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.61□□□□□ -0.39
FN1-217ENST00000471193 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 LRRC10BA6NIK2 292 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 LGALS16A8MUM7 142 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 AP5Z1O43299 807 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 IL18RAPO95256 599 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 SERPINC1P01008 464 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
FN1-217ENST00000471193 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
FN1-217ENST00000471193 DLG4P78352 724 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 CLDN10P78369 228 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 FAM189BP81408 668 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 FPGSQ05932 587 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
FN1-217ENST00000471193 SURF1Q15526 300 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
FN1-217ENST00000471193 SLC24A5Q71RS6 500 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms