RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PARNO95453 639 aaKnown RBP10.59□□□□□ -0.71
CCM2-204ENST00000470837 EDN1P05305 212 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 TRIM49P0CI25 452 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 TRIM49CP0CI26 452 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 STAG3L1P0CL83 205 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 GHRP10912 638 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 SKIP12755 728 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 SELPP16109 830 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 MXI1P50539 228 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 OSTNP61366 133 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 BIRC3Q13489 604 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 SYCP1Q15431 976 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 EXOC3L4Q17RC7 722 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 FAM26DQ5JW98 314 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 MIIPQ5JXC2 388 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 ZNF618Q5T7W0 954 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 EEF1DP3Q658K8 133 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 KRT39Q6A163 491 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 FAM43BQ6ZT52 329 aaPredicted RBP10.59□□□□□ -0.71
CCM2-204ENST00000470837 LRRC8DQ7L1W4 858 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 CDR2LQ86X02 465 aaPredicted RBP10.59□□□□□ -0.71
CCM2-204ENST00000470837 BRSK2Q8IWQ3 736 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 CD302Q8IX05 232 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 PIAS4Q8N2W9 510 aaPredicted RBP10.59□□□□□ -0.71
CCM2-204ENST00000470837 CACTINQ8WUQ7 758 aaKnown RBP10.59□□□□□ -0.71
CCM2-204ENST00000470837 TMEM40Q8WWA1 233 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 WNT8BQ93098 351 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 BORCS6Q96GS4 357 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 PDLIM2Q96JY6 352 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 MFSD14AQ96MC6 490 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 TOX2Q96NM4 488 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 ERGIC2Q96RQ1 377 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 PTPRHQ9HD43 1115 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 ST3GAL5Q9UNP4 418 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 ATP11BQ9Y2G3 1177 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 CEP350Q5VT06 3117 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 SCN10AQ9Y5Y9 1956 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 WDR81Q562E7 1941 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 MYH11P35749 1972 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 PITPNM1O00562 1244 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 TNNC2P02585 160 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 ADRB2P07550 413 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 TMEM191BP0C7N4 346 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 CD52P31358 61 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 GRM5P41594 1212 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 GCLMP48507 274 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 FMO5P49326 533 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 RAB27AP51159 221 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 MGAT3Q09327 533 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.72
CCM2-204ENST00000470837 TRIM60Q495X7 471 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 SEZ6Q53EL9 994 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 WDR44Q5JSH3 913 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 FBXO47Q5MNV8 452 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 CACNA2D4Q7Z3S7 1137 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 FAM228AQ86W67 206 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 WDR49Q8IV35 697 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 CNGA4Q8IV77 575 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 PARD3BQ8TEW8 1205 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 DHX38Q92620 1227 aaKnown RBP10.58□□□□□ -0.72
CCM2-204ENST00000470837 ANKRD36BP1Q96IX9 119 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 PAWRQ96IZ0 340 aaKnown RBP10.58□□□□□ -0.72
CCM2-204ENST00000470837 CGRRF1Q99675 332 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 LSM14BQ9BX40 385 aaKnown RBP10.58□□□□□ -0.72
CCM2-204ENST00000470837 IMPG2Q9BZV3 1241 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 HIPK3Q9H422 1215 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 ASB7Q9H672 318 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 PLEKHA5Q9HAU0 1116 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 TMEM8AQ9HCN3 771 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 FAM207AQ9NSI2 230 aaPredicted RBP10.58□□□□□ -0.72
CCM2-204ENST00000470837 ZNHIT6Q9NWK9 470 aaKnown RBP10.58□□□□□ -0.72
CCM2-204ENST00000470837 GCNT4Q9P109 453 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 PARP2Q9UGN5 583 aa10.58□□□□□ -0.72
CCM2-204ENST00000470837 CPSF3Q9UKF6 684 aaKnown RBP10.58□□□□□ -0.72
CCM2-204ENST00000470837 KAT6AQ92794 2004 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 LRRIQ3A6PVS8 624 aaPredicted RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 AKR1B15C9JRZ8 316 aaPredicted RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 XPOTO43592 962 aaKnown RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 CD4P01730 458 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 HOXA11P31270 313 aaPredicted RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 TFAMQ00059 246 aaKnown RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 TLE2Q04725 743 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 RBL2Q08999 1139 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 TRPC3Q13507 836 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 LPIN1Q14693 890 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 DUOXA2Q1HG44 320 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 CCDC186Q7Z3E2 898 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 FMNL3Q8IVF7 1028 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 ZSWIM2Q8NEG5 633 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 DIS3LQ8TF46 1054 aaKnown RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 CPLX3Q8WVH0 158 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 CRACR2AQ9BSW2 395 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 APOL6Q9BWW8 343 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 FTHL17Q9BXU8 183 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 IFIH1Q9BYX4 1025 aaKnown RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 HAPLN2Q9GZV7 340 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 PDE11AQ9HCR9 933 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms