RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 CBWD1Q9BRT8 395 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 TMEM117Q9H0C3 514 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 NXF3Q9H4D5 531 aaKnown RBP13.78□□□□□ -0.2
SND1-209ENST00000470723 SNTG2Q9NY99 539 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 KANSL3Q9P2N6 904 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 LRFN2Q9ULH4 789 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 MAPK8IP1Q9UQF2 711 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 HES2Q9Y543 173 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 TRIP11Q15643 1979 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 TTC26A0AVF1 554 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 MAPK13O15264 365 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 MEFVO15553 781 aaPredicted RBP13.77□□□□□ -0.21
SND1-209ENST00000470723 CALUO43852 315 aaPredicted RBP13.77□□□□□ -0.21
SND1-209ENST00000470723 KCNE1P15382 129 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 ERCC5P28715 1186 aaPredicted RBP13.77□□□□□ -0.21
SND1-209ENST00000470723 LRRC63Q05C16 580 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 HSP90AA2PQ14568 343 aaPredicted RBP13.77□□□□□ -0.21
SND1-209ENST00000470723 ANKRD40Q6AI12 368 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
SND1-209ENST00000470723 CD302Q8IX05 232 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 TMEM192Q8IY95 271 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 XXYLT1Q8NBI6 393 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 LPPQ93052 612 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 P2RX5Q93086 422 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 CCDC94Q9BW85 323 aaPredicted RBP13.77□□□□□ -0.21
SND1-209ENST00000470723 HSPBP1Q9NZL4 362 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 PCDHA11Q9Y5I1 949 aa13.77□□□□□ -0.21
SND1-209ENST00000470723 TRIOBPQ9H2D6 2365 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 ARL5CA6NH57 179 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 PSMA7O14818 248 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 CLIC2O15247 247 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 UPP2O95045 317 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 AKAP5P24588 427 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 FKBP3Q00688 224 aaKnown RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 ENPEPQ07075 957 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 ZBTB6Q15916 424 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 FAM109BQ6ICB4 259 aaPredicted RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 TTI2Q6NXR4 508 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 ARMCX5Q6P1M9 558 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 GLB1LQ6UWU2 654 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 TMCO2Q7Z6W1 182 aaPredicted RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
SND1-209ENST00000470723 GPD1LQ8N335 351 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 CEP120Q8N960 986 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 ZSWIM2Q8NEG5 633 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 MED15Q96RN5 788 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 ASB7Q9H672 318 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 MIOSQ9NXC5 875 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 RWDD2AQ9UIY3 292 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 CITO14578 2027 aa13.76□□□□□ -0.21
SND1-209ENST00000470723 ZNF233A6NK53 670 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 GRXCR1A8MXD5 290 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 RECQL4O94761 1208 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 NR3C1P04150 777 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 FGFR1P11362 822 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 ACOT2P49753 483 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 AFF1P51825 1210 aaKnown RBP13.75□□□□□ -0.21
SND1-209ENST00000470723 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
SND1-209ENST00000470723 ADAM9Q13443 819 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 NAB2Q15742 525 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 ZBTB41Q5SVQ8 909 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 SASS6Q6UVJ0 657 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 LRRC55Q6ZSA7 311 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 CLP1Q92989 425 aaKnown RBP13.75□□□□□ -0.21
SND1-209ENST00000470723 BORCS6Q96GS4 357 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 GAD1Q99259 594 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 DUSP9Q99956 384 aaKnown RBP13.75□□□□□ -0.21
SND1-209ENST00000470723 FUCA2Q9BTY2 467 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 PCIF1Q9H4Z3 704 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 RPF1Q9H9Y2 349 aaKnown RBP13.75□□□□□ -0.21
SND1-209ENST00000470723 TOPORSQ9NS56 1045 aaPredicted RBP13.75□□□□□ -0.21
SND1-209ENST00000470723 ANO10Q9NW15 660 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 CNTN3Q9P232 1028 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 PARP2Q9UGN5 583 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.75□□□□□ -0.21
SND1-209ENST00000470723 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
SND1-209ENST00000470723 SMIM28A0A1B0GU29 152 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 BICDL2A1A5D9 508 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 LACTBL1A8MY62 500 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 PTGESO14684 152 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 TLL1O43897 1013 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 LINC00271P0C7V0 271 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 TNFSF9P41273 254 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 MATR3P43243 847 aaKnown RBP eCLIP13.74□□□□□ -0.211e-6■■■□□ 17.4
SND1-209ENST00000470723 YARSP54577 528 aaKnown RBP13.74□□□□□ -0.21
SND1-209ENST00000470723 CLDN10P78369 228 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 SEZ6Q53EL9 994 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 FILIP1Q7Z7B0 1213 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms