RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ZNF131P52739 623 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 LRRC63Q05C16 580 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 SPAG1Q07617 926 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 EHHADHQ08426 723 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 HSP90AA2PQ14568 343 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-202ENST00000470357 IQCB1Q15051 598 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 PPP2R5AQ15172 486 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 UGCGQ16739 394 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 TPD52L1Q16890 204 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-202ENST00000470357 HSDL1Q3SXM5 330 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ARSHQ5FYA8 562 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 SPATA1Q5VX52 437 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ISM2Q6H9L7 571 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 C11orf57Q6ZUT1 292 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ANO5Q75V66 913 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 FAM114A1Q8IWE2 563 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 MYOCDQ8IZQ8 938 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ADSSL1Q8N142 457 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 RNF214Q8ND24 703 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ANKRD20A12PQ8NF67 263 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 OR6J1Q8NGC5 347 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ATP8B4Q8TF62 1192 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 NOC3LQ8WTT2 800 aaKnown RBP7.3□□□□□ -1.24
VAMP3-202ENST00000470357 TCP11Q8WWU5 503 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 CLP1Q92989 425 aaKnown RBP7.3□□□□□ -1.24
VAMP3-202ENST00000470357 HVCN1Q96D96 273 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 RUSC1Q9BVN2 902 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ZHX3Q9H4I2 956 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 ATP6V0A4Q9HBG4 840 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.3□□□□□ -1.242e-6■■■■■ 149.1
VAMP3-202ENST00000470357 PDGFCQ9NRA1 345 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 FLRT1Q9NZU1 646 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 WRAP73Q9P2S5 460 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-202ENST00000470357 XIRP2A4UGR9 3374 aa7.3□□□□□ -1.24
VAMP3-202ENST00000470357 CHD9Q3L8U1 2897 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 MAGEB2O15479 319 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 SEPT4O43236 478 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 MSCO60682 206 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 USO1O60763 962 aaKnown RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 HIP1RO75146 1068 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 STBD1O95210 358 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 LGALS2P05162 132 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 TPM3P06753 285 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 MMP3P08254 477 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 PLS3P13797 630 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 BMP6P22004 513 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 CCNE1P24864 410 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 CYP2C19P33261 490 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 PRCPP42785 496 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 DNM2P50570 870 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 POLGP54098 1239 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 SNRPFP62306 86 aaKnown RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 SMAD3P84022 425 aaKnown RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 STK4Q13043 487 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 ZNF484Q5JVG2 852 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 ODR4Q5SWX8 454 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 UTP14CQ5TAP6 766 aaKnown RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 C1orf229Q6ZS94 237 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 CAPN12Q6ZSI9 719 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 BTLAQ7Z6A9 289 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 TLK2Q86UE8 772 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 LUZP1Q86V48 1076 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 FAM178BQ8IXR5 827 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 MYCT1Q8N699 235 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 AOPEPQ8N6M6 819 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 USP38Q8NB14 1042 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 RETREG2Q8NC44 543 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 GOLGA5Q8TBA6 731 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 AFG1LQ8WV93 481 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 NELFBQ8WX92 580 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 P2RX5Q93086 422 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 IFT74Q96LB3 600 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 MKNK1Q9BUB5 465 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 KATNAL1Q9BW62 490 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 SENP6Q9GZR1 1112 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 MRPL44Q9H9J2 332 aaKnown RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 CXXC1Q9P0U4 656 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 CGNQ9P2M7 1197 aaKnown RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 DNMT3AQ9Y6K1 912 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-202ENST00000470357 LTBP2Q14767 1821 aa7.29□□□□□ -1.24
VAMP3-202ENST00000470357 CARNS1A5YM72 827 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 RRN3P2A6NIE6 340 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 ZBTB39O15060 712 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 ASAP2O43150 1006 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 DYNC1LI2O43237 492 aaPredicted RBP7.28□□□□□ -1.24
VAMP3-202ENST00000470357 CBFA2T2O43439 604 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 OIP5O43482 229 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 SORBS3O60504 671 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 TPM2P07951 284 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 RARBP10826 455 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 CYBAP13498 195 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 CDK11BP21127 795 aaKnown RBP7.28□□□□□ -1.24
VAMP3-202ENST00000470357 NPEPPSP55786 919 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 RAD51AP2Q09MP3 1159 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 TBC1D8BQ0IIM8 1120 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 DMP1Q13316 513 aaPredicted RBP7.28□□□□□ -1.24
VAMP3-202ENST00000470357 MXD4Q14582 209 aaPredicted RBP7.28□□□□□ -1.24
VAMP3-202ENST00000470357 EMC2Q15006 297 aa7.28□□□□□ -1.24
VAMP3-202ENST00000470357 TARBP2Q15633 366 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms