RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 VPS52Q8N1B4 723 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 RPS6KC1Q96S38 1066 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 FIZ1Q96SL8 496 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 CDT1Q9H211 546 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 CXCL16Q9H2A7 254 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 STK39Q9UEW8 545 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 RCOR1Q9UKL0 485 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 CFAP45Q9UL16 551 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 GDAQ9Y2T3 454 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 IRAK3Q9Y616 596 aa15.52■□□□□ 0.08
TOP3B-215ENST00000470338 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 C2orf71A6NGG8 1288 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 MYMKA6NI61 221 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 H3BQ06 376 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-215ENST00000470338 PER2O15055 1255 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 TBX10O75333 385 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 TBCAO75347 108 aaKnown RBP15.51■□□□□ 0.07
TOP3B-215ENST00000470338 TOM1L1O75674 476 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 CXCL14O95715 111 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 GLP2RO95838 553 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 CTSAP10619 480 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 MCF2P10911 925 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 GRM5P41594 1212 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 STAT6P42226 847 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 OR1G1P47890 313 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 DNM1Q05193 864 aaKnown RBP15.51■□□□□ 0.07
TOP3B-215ENST00000470338 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
TOP3B-215ENST00000470338 NAB2Q15742 525 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 PUS10Q3MIT2 529 aaKnown RBP15.51■□□□□ 0.07
TOP3B-215ENST00000470338 ZNF568Q3ZCX4 644 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 SHC4Q6S5L8 630 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 MPZL3Q6UWV2 235 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 ALKAL1Q6UXT8 129 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 EP400NLQ6ZTU2 488 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 ADAMTS19Q8TE59 1207 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 DDX12PQ92771 950 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 DNAJC19Q96DA6 116 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 ZBTB45Q96K62 511 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-215ENST00000470338 MARCH5Q9NX47 278 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 C5orf42Q9H799 3197 aa15.51■□□□□ 0.07
TOP3B-215ENST00000470338 BDP1A6H8Y1 2624 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 GRXCR2A6NFK2 248 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 NR1I2O75469 434 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 THP07101 528 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 ABCD1P33897 745 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 GTF2BQ00403 316 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 TUSC3Q13454 348 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 BECN1Q14457 450 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 E2F4Q16254 413 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 XKR4Q5GH76 650 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 TMEM184AQ6ZMB5 413 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 DYMQ7RTS9 669 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 ZBTB33Q86T24 672 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 FAM178BQ8IXR5 827 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 RNF168Q8IYW5 571 aaPredicted RBP15.5■□□□□ 0.07
TOP3B-215ENST00000470338 PDILTQ8N807 584 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 CEP120Q8N960 986 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 MSLNLQ96KJ4 702 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 TCHPQ9BT92 498 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 COLEC11Q9BWP8 271 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 ST6GALNAC4Q9H4F1 302 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 CLEC1BQ9P126 229 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 TBX20Q9UMR3 447 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 PCDHA7Q9UN72 937 aa15.5■□□□□ 0.07
TOP3B-215ENST00000470338 PRG3Q9Y2Y8 225 aaPredicted RBP15.5■□□□□ 0.07
TOP3B-215ENST00000470338 K7ENM7 598 aa15.49■□□□□ 0.07
TOP3B-215ENST00000470338 PIGRP01833 764 aa15.49■□□□□ 0.07
TOP3B-215ENST00000470338 NMT1P30419 496 aaKnown RBP15.49■□□□□ 0.07
TOP3B-215ENST00000470338 MCL1Q07820 350 aa15.49■□□□□ 0.07
TOP3B-215ENST00000470338 PTCRAQ6ISU1 281 aaPredicted RBP15.49■□□□□ 0.07
TOP3B-215ENST00000470338 VN1R2Q8NFZ6 395 aa15.49■□□□□ 0.07
TOP3B-215ENST00000470338 PPP1R10Q96QC0 940 aaKnown RBP15.49■□□□□ 0.07
TOP3B-215ENST00000470338 CCDC94Q9BW85 323 aaPredicted RBP15.49■□□□□ 0.07
TOP3B-215ENST00000470338 CUEDC2Q9H467 287 aa15.49■□□□□ 0.07
TOP3B-215ENST00000470338 ZHX3Q9H4I2 956 aa15.49■□□□□ 0.07
TOP3B-215ENST00000470338 SEL1LQ9UBV2 794 aa15.49■□□□□ 0.07
TOP3B-215ENST00000470338 MUC3AQ02505 3323 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 F8W810 466 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 CLDN3O15551 220 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 LILRB3O75022 631 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 CLASP2O75122 1294 aaKnown RBP15.48■□□□□ 0.07
TOP3B-215ENST00000470338 SOD2P04179 222 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 GAP43P17677 238 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 ME1P48163 572 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 NDUFV1P49821 464 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 YARSP54577 528 aaKnown RBP15.48■□□□□ 0.07
TOP3B-215ENST00000470338 COASYQ13057 564 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 NOLC1Q14978 699 aaKnown RBP eCLIP15.48■□□□□ 0.07
TOP3B-215ENST00000470338 PTPN14Q15678 1187 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 TAS1R1Q7RTX1 841 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 ZNF720Q7Z2F6 126 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 AUTS2Q8WXX7 1259 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 ACAP3Q96P50 834 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 UHRF1Q96T88 793 aaPredicted RBP15.48■□□□□ 0.07
TOP3B-215ENST00000470338 PAAF1Q9BRP4 392 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 STRA6Q9BX79 667 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 HAPLN2Q9GZV7 340 aa15.48■□□□□ 0.07
TOP3B-215ENST00000470338 TOPORSQ9NS56 1045 aaPredicted RBP15.48■□□□□ 0.07
TOP3B-215ENST00000470338 KBTBD4Q9NVX7 518 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms