RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ZYXQ15942 572 aaKnown RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 SNRNP35Q16560 246 aaKnown RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 UGCGQ16739 394 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 FAM83AQ86UY5 434 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 CBWD2Q8IUF1 395 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 TMEM161BQ8NDZ6 487 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 SYTL5Q8TDW5 730 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 CCT6BQ92526 530 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 MFSD14AQ96MC6 490 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 A1CFQ9NQ94 594 aaKnown RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 TBX20Q9UMR3 447 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 PASKQ96RG2 1323 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 H0YHG0 523 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 DNM1LO00429 736 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 ASAP2O43150 1006 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 RWDD2BP57060 319 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 PSMC5P62195 406 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 MAP2K1Q02750 393 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 MTMR1Q13613 665 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 UBAP2Q5T6F2 1119 aaKnown RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 ACAD10Q6JQN1 1059 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 RHBDF2Q6PJF5 856 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 CPNE8Q86YQ8 564 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 CDAN1Q8IWY9 1227 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 PPM1KQ8N3J5 372 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 MTMR14Q8NCE2 650 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 NTPCRQ9BSD7 190 aaKnown RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 ROPN1BQ9BZX4 212 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 KDM4CQ9H3R0 1056 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 AZI2Q9H6S1 392 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 ROPN1Q9HAT0 212 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 ACP6Q9NPH0 428 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 GPRC5CQ9NQ84 441 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 PKD2L1Q9P0L9 805 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 CHORDC1Q9UHD1 332 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 FAM170AA1A519 330 aa14.64□□□□□ -0.07
BRCA1-209ENST00000470026 RGS16O15492 202 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-209ENST00000470026 CTNND1O60716 968 aaKnown RBP14.64□□□□□ -0.07
BRCA1-209ENST00000470026 IFI35P80217 286 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-209ENST00000470026 TRMT10CQ7L0Y3 403 aaKnown RBP14.64□□□□□ -0.07
BRCA1-209ENST00000470026 PIGWQ7Z7B1 504 aa14.64□□□□□ -0.07
BRCA1-209ENST00000470026 ZNF653Q96CK0 615 aa14.64□□□□□ -0.07
BRCA1-209ENST00000470026 TAOK3Q9H2K8 898 aa14.64□□□□□ -0.07
BRCA1-209ENST00000470026 WHRNQ9P202 907 aa14.64□□□□□ -0.07
BRCA1-209ENST00000470026 GOLGA8IPA6NC78 632 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 GOLGA8JA6NMD2 632 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 SPOPO43791 374 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 ASNSP08243 561 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 SFNP31947 248 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 JAK3P52333 1124 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 AUHQ13825 339 aaKnown RBP14.63□□□□□ -0.07
BRCA1-209ENST00000470026 MIGA2Q7L4E1 593 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 CPLX4Q7Z7G2 160 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 CCDC105Q8IYK2 499 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 SPIRE2Q8WWL2 714 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 BTBD6Q96KE9 485 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 NT5C1BQ96P26 610 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 STMN4Q9H169 189 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-209ENST00000470026 AVENQ9NQS1 362 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-209ENST00000470026 TMEM150BA6NC51 233 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 WDR46O15213 610 aaKnown RBP14.63□□□□□ -0.07
BRCA1-209ENST00000470026 ECEL1O95672 775 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 CCNE2O96020 404 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 CNGA1P29973 690 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 NPTX2P47972 431 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 PDE6CP51160 858 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 CLEC16AQ2KHT3 1053 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 SLC39A4Q6P5W5 647 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 RNF207Q6ZRF8 634 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 FBXL13Q8NEE6 735 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 RDM1Q8NG50 284 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 TMEM39BQ9GZU3 492 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 SLC40A1Q9NP59 571 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 AAASQ9NRG9 546 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 RAB20Q9NX57 234 aa14.63□□□□□ -0.07
BRCA1-209ENST00000470026 ZC3H11AO75152 810 aaKnown RBP eCLIP14.62□□□□□ -0.07
BRCA1-209ENST00000470026 UNGP13051 313 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-209ENST00000470026 KRT76Q01546 638 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 GCNT1Q02742 428 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 PPARDQ03181 441 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 ITIH4Q14624 930 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 PGM5Q15124 567 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 SYDE1Q6ZW31 735 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-209ENST00000470026 ENOSF1Q7L5Y1 443 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 TAS1R2Q8TE23 839 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 EPS8L3Q8TE67 593 aaKnown RBP14.62□□□□□ -0.07
BRCA1-209ENST00000470026 LPAR1Q92633 364 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 KIFAP3Q92845 792 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 ZBED3Q96IU2 234 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-209ENST00000470026 JPH2Q9BR39 696 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-209ENST00000470026 C17orf75Q9HAS0 396 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 SLC38A10Q9HBR0 1119 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 KLC4Q9NSK0 619 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 WDR81Q562E7 1941 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 GOLGA6L7A0A1B0GV03 622 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 WDR64B1ANS9 1081 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms