RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 CLUL1Q15846 466 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 KCTD17Q8N5Z5 321 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 TMEM174Q8WUU8 243 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 NUP85Q9BW27 656 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 PARP2Q9UGN5 583 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.03□□□□□ -0.64
SMC4-210ENST00000469762 CYP26A1O43174 497 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 HLA-DOAP06340 250 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 CDC25CP30307 473 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 FOXN2P32314 431 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 MCCD1P59942 119 aaPredicted RBP11.03□□□□□ -0.64
SMC4-210ENST00000469762 COPS2P61201 443 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 ICA1Q05084 483 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 NSMFQ6X4W1 530 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 RNF207Q6ZRF8 634 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 TRMT10CQ7L0Y3 403 aaKnown RBP11.03□□□□□ -0.64
SMC4-210ENST00000469762 PRUNE1Q86TP1 453 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 ERICH1Q86X53 443 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 SERPINB12Q96P63 405 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 TMEM117Q9H0C3 514 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 PRR12Q9ULL5 1215 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
SMC4-210ENST00000469762 RFX1P22670 979 aa11.02□□□□□ -0.64
SMC4-210ENST00000469762 VAMP7P51809 220 aa11.02□□□□□ -0.64
SMC4-210ENST00000469762 KRT17Q04695 432 aa11.02□□□□□ -0.64
SMC4-210ENST00000469762 KYNUQ16719 465 aa11.02□□□□□ -0.64
SMC4-210ENST00000469762 NUGGCQ68CJ6 796 aa11.02□□□□□ -0.64
SMC4-210ENST00000469762 HS2ST1Q7LGA3 356 aa11.02□□□□□ -0.64
SMC4-210ENST00000469762 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.64
SMC4-210ENST00000469762 ZNF564Q8TBZ8 553 aaPredicted RBP11.02□□□□□ -0.64
SMC4-210ENST00000469762 R3HDM2Q9Y2K5 976 aaKnown RBP11.02□□□□□ -0.64
SMC4-210ENST00000469762 LOXHD1Q8IVV2 1947 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 O00370 1275 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 TTC4O95801 387 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 ADRB2P07550 413 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 GZMAP12544 262 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 GBP1P32455 592 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 CRKP46108 304 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 PRELPP51888 382 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 ECHDC2Q86YB7 292 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 GDAP1Q8TB36 358 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 ADAM22Q9P0K1 906 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 WHRNQ9P202 907 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 SKAP2O75563 359 aaPredicted RBP11.02□□□□□ -0.65
SMC4-210ENST00000469762 BCRP11274 1271 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 CLNS1AP54105 237 aaKnown RBP11.02□□□□□ -0.65
SMC4-210ENST00000469762 SNX1Q13596 522 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 SEL1L2Q5TEA6 688 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 DAB2IPQ5VWQ8 1189 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
SMC4-210ENST00000469762 CCNB1P14635 433 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 GCAP28676 217 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 LLGL2Q6P1M3 1020 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 SP8Q8IXZ3 490 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 SHC3Q92529 594 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 ZDHHC15Q96MV8 337 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 SRCAPQ6ZRS2 3230 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 ECEL1O95672 775 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 ZNF76P36508 570 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 BZW1Q7L1Q6 419 aaKnown RBP11.01□□□□□ -0.65
SMC4-210ENST00000469762 MAEAQ7L5Y9 396 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 TAOK1Q7L7X3 1001 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 ANKRD42Q8N9B4 389 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 TEKT1Q969V4 418 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 LXNQ9BS40 222 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 NINJ2Q9NZG7 142 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 TCEA3O75764 348 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 TAC1P20366 129 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 ITGA8P53708 1063 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 WDR4P57081 412 aaKnown RBP11.01□□□□□ -0.65
SMC4-210ENST00000469762 MYBPC2Q14324 1141 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 RASA3Q14644 834 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 TRIP13Q15645 432 aaPredicted RBP11.01□□□□□ -0.65
SMC4-210ENST00000469762 ZKSCAN8Q15776 578 aaPredicted RBP11.01□□□□□ -0.65
SMC4-210ENST00000469762 SPATA21Q7Z572 469 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 RXFP1Q9HBX9 757 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 ECE1P42892 770 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 SLC8A3P57103 927 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 SPP2Q13103 211 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 CROCCP2Q86T23 111 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 DHX38Q92620 1227 aaKnown RBP11.01□□□□□ -0.65
SMC4-210ENST00000469762 RUNDC3BQ96NL0 473 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 SH2D3AQ9BRG2 576 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 HOMER3Q9NSC5 361 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 GRID1Q9ULK0 1009 aa11.01□□□□□ -0.65
SMC4-210ENST00000469762 POLRMTO00411 1230 aaKnown RBP11□□□□□ -0.65
SMC4-210ENST00000469762 PPEF1O14829 653 aaPredicted RBP11□□□□□ -0.65
SMC4-210ENST00000469762 BMP3P12645 472 aa11□□□□□ -0.65
SMC4-210ENST00000469762 CYP11B1P15538 503 aa11□□□□□ -0.65
SMC4-210ENST00000469762 ADSSP30520 456 aa11□□□□□ -0.65
SMC4-210ENST00000469762 ABL2P42684 1182 aa11□□□□□ -0.65
SMC4-210ENST00000469762 INTS8Q75QN2 995 aaKnown RBP11□□□□□ -0.65
SMC4-210ENST00000469762 MORC4Q8TE76 937 aa11□□□□□ -0.65
SMC4-210ENST00000469762 NACC1Q96RE7 527 aa11□□□□□ -0.65
SMC4-210ENST00000469762 PI4KBQ9UBF8 816 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms