RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 KIAA0100Q14667 2235 aaKnown RBP10.6□□□□□ -0.71
NUP50-214ENST00000469163 A0A087X0B3 334 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 SPECC1L-ADORA2AF8WAN1 911 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 PTPRAP18433 802 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 MSH2P43246 934 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 CKAP4Q07065 602 aaKnown RBP10.6□□□□□ -0.71
NUP50-214ENST00000469163 KLC3Q6P597 504 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 DPP9Q86TI2 863 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 PPFIBP1Q86W92 1011 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 DQX1Q8TE96 717 aaKnown RBP10.6□□□□□ -0.71
NUP50-214ENST00000469163 DHTKD1Q96HY7 919 aaPredicted RBP10.6□□□□□ -0.71
NUP50-214ENST00000469163 DNAJC1Q96KC8 554 aaKnown RBP10.6□□□□□ -0.71
NUP50-214ENST00000469163 ANKRD27Q96NW4 1050 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 CEP44Q9C0F1 390 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 CPA4Q9UI42 421 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 TRIM33Q9UPN9 1127 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 ZCCHC18P0CG32 403 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 MTIF2P46199 727 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 EPHB4P54760 987 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 SOX10P56693 466 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 MYL5Q02045 173 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 NCAPHQ15003 741 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 PPP2R5BQ15173 497 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 PPP4R3AQ6IN85 833 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 TRIM67Q6ZTA4 783 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 GDAP1Q8TB36 358 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 ATP6V1G3Q96LB4 118 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 DDX50Q9BQ39 737 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 SAMSN1Q9NSI8 373 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 PCDH10Q9P2E7 1040 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 ZNF831Q5JPB2 1677 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 TRAPPC3O43617 180 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 B3GALNT1O75752 331 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 PDE5AO76074 875 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 OXSR1O95747 527 aaPredicted RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 KRT16P08779 473 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 FCER1AP12319 257 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 FUT2Q10981 343 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 GLE1Q53GS7 698 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 SH3D19Q5HYK7 790 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 AGAP9Q5VTM2 703 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 GPBP1Q86WP2 473 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 DYDC2Q96IM9 177 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 GMLQ99445 158 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 P2RX7Q99572 595 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 BCAS3Q9H6U6 928 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 ECT2Q9H8V3 914 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 TAB2Q9NYJ8 693 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 NYAP2Q9P242 653 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 CTNNAL1Q9UBT7 734 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 HSPA1AP0DMV8 641 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 HSPA1BP0DMV9 641 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 PEX5P50542 639 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 BACE1P56817 501 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 HPCAP84074 193 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 ARHGEF6Q15052 776 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 CCDC153Q494R4 210 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 DCAF17Q5H9S7 520 aaPredicted RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 IRGCQ6NXR0 463 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 SCYL3Q8IZE3 742 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 METTL13Q8N6R0 699 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 FAM192AQ9GZU8 254 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 TUT1Q9H6E5 874 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 JADE2Q9NQC1 790 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 SEPT11Q9NVA2 429 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 BTBD7Q9P203 1132 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 MAGEC2Q9UBF1 373 aaPredicted RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 MOSPD1Q9UJG1 213 aa10.59□□□□□ -0.71
NUP50-214ENST00000469163 FBXO2Q9UK22 296 aaPredicted RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 MRPL11Q9Y3B7 192 aaKnown RBP10.59□□□□□ -0.71
NUP50-214ENST00000469163 AKR1B15C9JRZ8 316 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 FZD9O00144 591 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 NOP56O00567 594 aaKnown RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 CLIC2O15247 247 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 ASLP04424 464 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 UBTFL6P0CB48 400 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 ENPP1P22413 925 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 CDK17Q00537 523 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 KCTD21Q4G0X4 260 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 SV2BQ7L1I2 683 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 FMR1NBQ8N0W7 255 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 SYT2Q8N9I0 419 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 IL31RAQ8NI17 732 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 ELMO3Q96BJ8 720 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 C2orf49Q9BVC5 232 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 ALDH8A1Q9H2A2 487 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 LRRC42Q9Y546 428 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 CCL15-CCL14A0A0B4J2E2 113 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 CSDE1O75534 798 aaKnown RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 GSTA1P08263 222 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 ARP10275 920 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 ALADP13716 330 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 PORP16435 677 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 DDX5P17844 614 aaKnown RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 S100A1P23297 94 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
NUP50-214ENST00000469163 CCDC6Q16204 474 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms